Stem-loop oha-mir-22a

Accession

MI0031425

Description

Ophiophagus hannah oha-mir-22a precursor miRNA

Sequence

cuacccgcagcaguucuucaguggcacgcuuuacguccccuccagcaacuaAAGCUGCCAGUUGAAGAACUGUuggccguagc
((((...(((((((((((((((((((.((((((.((..(.....)..))))))))))))).))))))))))))))...)))).

Structure

-    ccg              -     c      c  cc c 
 cuac   cagcaguucuucag uggca gcuuua gu  c u
 ||||   |||||||||||||| ||||| |||||| ||  | c
 gaug   guUGUCAAGAAGUU ACCGU CGAAau ca  g c
c    ccg              G     -      -  ac a 

Annotation confidence Low

Genome context

AZIM01069197.1: 502-584 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-22a

Mature oha-miR-22a

• Accession: MIMAT0036845
• Description: Ophiophagus hannah oha-miR-22a mature miRNA
• Sequence: 52 - AAGCUGCCAGUUGAAGAACUGU - 73
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656