miRBase entry: oha-mir-200a

Stem-loop oha-mir-200a

Accession

MI0031401

Description

Ophiophagus hannah oha-mir-200a precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

gaucgugguccucuguggacaucuuacuagacagugcuggauuuugucaguguacucUAACACUGUCUGGUAACGAUGUUuaaagagugagccaaacu
.....(((((((((.(((((((((((((((((((((.((((..............)))).))))))))))))).)))))))).)))).)).)))....

Structure

gaucg   -  -    g        -             c    uuuugu 
     ugg uc cucu uggacauc uuacuagacagug ugga      c
     ||| || |||| |||||||| ||||||||||||| ||||       
     acc ag gaga auUUGUAG AAUGGUCUGUCAC AUcu      a
-ucaa   g  u    a        C             A    caugug

Annotation confidence Not enough data

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Genome context

AZIM01000256.1: 133883-133980 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-200a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-200a

Accession	MIMAT0036807
Description	Ophiophagus hannah oha-miR-200a mature miRNA
Sequence	58 - UAACACUGUCUGGUAACGAUGUU - 80
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656