miRBase entry: oha-mir-133b

Stem-loop oha-mir-133b

Accession

MI0031343

Description

Ophiophagus hannah oha-mir-133b precursor miRNA

Sequence

gcauugcucugGCUGGUCAAAAGGAACCAAGgccgucucuccuggaggUUUGGUCCCCUUCAACCAGCUAUagcagugcugaccuu
((((((((.((((((((..((.((.((((((.((.((......)).)))))))).)).))..)))))))).)))))))).......

Structure

-------        c        CA  A  A      g  g  uc 
       gcauugcu ugGCUGGU  AA GG ACCAAG cc uc  u
       |||||||| ||||||||  || || |||||| || ||   
       cgugacga AUCGACCA  UU CC UGGUUU gg gg  c
uuccagu        U        AC  C  C      -  a  uc

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

AZIM01001691.1: 30573-30658 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-133b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-133b-5p

Accession	MIMAT0036701
Description	Ophiophagus hannah oha-miR-133b-5p mature miRNA
Sequence	12 - GCUGGUCAAAAGGAACCAAG - 31
Evidence	not_experimental

Mature oha-miR-133b-3p

Accession	MIMAT0036702
Description	Ophiophagus hannah oha-miR-133b-3p mature miRNA
Sequence	49 - UUUGGUCCCCUUCAACCAGCUAU - 71
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656