Stem-loop oha-mir-17

Accession

MI0031372

Description

Ophiophagus hannah oha-mir-17 precursor miRNA

Sequence

ucauguuagaauaauguCAAAGUGCUUACAGUGCAGGUAGUgauuuauagaaccuACUGCAGUGAAGGCACUUGUAGcauuaugcuggcaag
...((((((.(((((((..((((((((.((.(((((...((..........))...))))).)).))))))))...))))))).))))))..

Structure

uca      a       -CA        A  G     GUA  gauu 
   uguuag auaaugu   AAGUGCUU CA UGCAG   GU    u
   |||||| |||||||   |||||||| || |||||   ||     
   acgguc uauuacG   UUCACGGA GU ACGUC   ca    a
-ga      g       AUG        A  G     Auc  agau 

Annotation confidence Not enough data

Genome context

AZIM01002132.1: 158388-158479 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from oha-mir-17

Mature oha-miR-17-5p

• Accession: MIMAT0036751
• Description: Ophiophagus hannah oha-miR-17-5p mature miRNA
• Sequence: 18 - CAAAGUGCUUACAGUGCAGGUAGU - 41
• Evidence: not_experimental

Mature oha-miR-17-3p

• Accession: MIMAT0036752
• Description: Ophiophagus hannah oha-miR-17-3p mature miRNA
• Sequence: 56 - ACUGCAGUGAAGGCACUUGUAG - 77
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656