Stem-loop oha-mir-30e

Accession

MI0031449

Description

Ophiophagus hannah oha-mir-30e precursor miRNA

Sequence

ugccccUGUAAACAUCCUUGACUGGAAGCUGugcaggcucaaagaggCUUUCAGUCGGAUGUUUACAGCggcaggc
((((.((((((((((((..(((((((((((...............))))))))))))))))))))))).))))...

Structure

---    c            UU           Gugcag 
   ugcc cUGUAAACAUCC  GACUGGAAGCU      g
   |||| ||||||||||||  |||||||||||      c
   acgg GACAUUUGUAGG  CUGACUUUCgg      u
cgg    C            --           agaaac 

Annotation confidence Not enough data

Genome context

AZIM01001612.1: 354780-354855 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30e

Mature oha-miR-30e-5p

• Accession: MIMAT0036886
• Description: Ophiophagus hannah oha-miR-30e-5p mature miRNA
• Sequence: 7 - UGUAAACAUCCUUGACUGGAAGCUG - 31
• Evidence: not_experimental

Mature oha-miR-30e-3p

• Accession: MIMAT0036887
• Description: Ophiophagus hannah oha-miR-30e-3p mature miRNA
• Sequence: 48 - CUUUCAGUCGGAUGUUUACAGC - 69
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656