miRBase entry: oha-mir-30e

Stem-loop oha-mir-30e

Accession

MI0031449

Description

Ophiophagus hannah oha-mir-30e precursor miRNA

Sequence

ugccccUGUAAACAUCCUUGACUGGAAGCUGugcaggcucaaagaggCUUUCAGUCGGAUGUUUACAGCggcaggc
((((.((((((((((((..(((((((((((...............))))))))))))))))))))))).))))...

Structure

---    c            UU           Gugcag 
   ugcc cUGUAAACAUCC  GACUGGAAGCU      g
   |||| ||||||||||||  |||||||||||      c
   acgg GACAUUUGUAGG  CUGACUUUCgg      u
cgg    C            --           agaaac

Annotation confidence Not enough data

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Genome context

AZIM01001612.1: 354780-354855 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-30e-5p

Accession	MIMAT0036886
Description	Ophiophagus hannah oha-miR-30e-5p mature miRNA
Sequence	7 - UGUAAACAUCCUUGACUGGAAGCUG - 31
Evidence	not_experimental

Mature oha-miR-30e-3p

Accession	MIMAT0036887
Description	Ophiophagus hannah oha-miR-30e-3p mature miRNA
Sequence	48 - CUUUCAGUCGGAUGUUUACAGC - 69
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656