miRBase entry: oha-mir-3618

Stem-loop oha-mir-3618

Accession

MI0031462

Description

Ophiophagus hannah oha-mir-3618 precursor miRNA

Sequence

uauuuaagcugaaugcauugugauuuccaguaauugagacagugauucugaaagcUGUCCACAUUAAUGAAAAGAGCaauguagucagcuuaacug
...(((((((((.((((((((..(((.((.((((((.((((((..........)))))))).)))).)).)))..)))))))).)))))))))...

Structure

uau         a        ga   c  g    -  a      gauu 
   uuaagcuga ugcauugu  uuu ca uaau ug gacagu    c
   ||||||||| ||||||||  ||| || |||| || ||||||     
   aauucgacu auguaaCG  AAA GU AUUA AC CUGUcg    u
guc         g        AG   A  A    C  -      aaag

Annotation confidence Not enough data

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Genome context

AZIM01003844.1: 64757-64852 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-3618

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-3618

Accession	MIMAT0036911
Description	Ophiophagus hannah oha-miR-3618 mature miRNA
Sequence	56 - UGUCCACAUUAAUGAAAAGAGC - 77
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656