miRBase entry: oha-mir-145

Stem-loop oha-mir-145

Accession

MI0031358

Description

Ophiophagus hannah oha-mir-145 precursor miRNA

Sequence

ucgggGUCCAGUUUUCCCAGGAAUCCCUUagaagauaagaaggGGAUUCCUGGAAAUACUGUUCUugggguc
((.(((..((((.((.(((((((((((((...........))))))))))))).)).))))..))).))...

Structure

---  g   UC    U  C             agaa 
   uc ggG  CAGU UU CCAGGAAUCCCUU    g
   || |||  |||| || |||||||||||||    a
   gg uUC  GUCA AA GGUCCUUAGGgga    u
cug  g   UU    U  A             agaa

Annotation confidence Not enough data

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Genome context

AZIM01000254.1: 119187-119258 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-145

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-145-5p

Accession	MIMAT0036727
Description	Ophiophagus hannah oha-miR-145-5p mature miRNA
Sequence	6 - GUCCAGUUUUCCCAGGAAUCCCUU - 29
Evidence	not_experimental

Mature oha-miR-145-3p

Accession	MIMAT0036728
Description	Ophiophagus hannah oha-miR-145-3p mature miRNA
Sequence	44 - GGAUUCCUGGAAAUACUGUUCU - 65
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656