Stem-loop oha-mir-196c

Accession

MI0031391

Description

Ophiophagus hannah oha-mir-196c precursor miRNA

Gene family

MIPF0000031; mir-196

Sequence

ugaaaacuggucggugauuUAGGUAGUUUCUCGUUGUUGAGgcugaacauuccucucUCUGCAGCACGAAACUGCCUUCAucaccucaguuuaua
...(((((((..((((((..((((((((((..(((((.((((..((....))..).))).)))))..))))))))))..)))))))))))))...

Structure

uga       uc      uU          UC     U   - cu  a 
   aaacugg  ggugau  AGGUAGUUUC  GUUGU GAG g  ga c
   |||||||  ||||||  ||||||||||  ||||| ||| |  ||  
   uuugacu  ccacuA  UCCGUCAAAG  CGACG CUc c  cu a
aua       --      CU          CA     U   u uc  u 

Annotation confidence Not enough data

Genome context

AZIM01000260.1: 324589-324683 [+]

Mature oha-miR-196c-5p

• Accession: MIMAT0036787
• Description: Ophiophagus hannah oha-miR-196c-5p mature miRNA
• Sequence: 20 - UAGGUAGUUUCUCGUUGUUGAG - 41
• Evidence: not_experimental

Mature oha-miR-196c-3p

• Accession: MIMAT0036788
• Description: Ophiophagus hannah oha-miR-196c-3p mature miRNA
• Sequence: 58 - UCUGCAGCACGAAACUGCCUUCA - 80
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656