miRBase entry: oha-mir-22b

Stem-loop oha-mir-22b

Accession

MI0031424

Description

Ophiophagus hannah oha-mir-22b precursor miRNA

Sequence

gcuacggccaACAGUUCUUCAACUGGCAGCUUuaguugcuggaggggacguaaagcgugccacugaagaacugcugcggguag
.((((...((.((((((((((..((((((((((((((.((...)).))).)))))).))))).)))))))))).))...))))

Structure

g    ggc  A          AC     -      -   g  g 
 cuac   ca CAGUUCUUCA  UGGCA GCUUua guu cu  
 ||||   || ||||||||||  ||||| |||||| ||| || g
 gaug   gu gucaagaagu  accgu cgaaau cag gg  
-    ggc  c          -c     g      g   g  a

Annotation confidence Not enough data

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Genome context

AZIM01069197.1: 502-584 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-22b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-22b

Accession	MIMAT0036844
Description	Ophiophagus hannah oha-miR-22b mature miRNA
Sequence	11 - ACAGUUCUUCAACUGGCAGCUU - 32
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656