Stem-loop oha-mir-338

Accession

MI0031458

Description

Ophiophagus hannah oha-mir-338 precursor miRNA

Sequence

ccgUCAACAAUAUCCUGGUGCUGAgugaguggcacucggagacUCCAGCAUCAGUGAUUUUGUUGAagaggggg
((.(((((((.(((((((((((((((((((...))))....))).))))))))).))).)))))))...))...

Structure

---  --g       U   -         -   ----    g 
   cc   UCAACAA AUC CUGGUGCUG Agu    gagu  
   ||   ||||||| ||| ||||||||| |||    |||| g
   gg   AGUUGUU UAG GACUACGAC Uca    cuca  
ggg  aga       U   U         C   gagg    c 

Annotation confidence Not enough data

Genome context

AZIM01000013.1: 479336-479409 [-]

Mature oha-miR-338-5p

• Accession: MIMAT0036903
• Description: Ophiophagus hannah oha-miR-338-5p mature miRNA
• Sequence: 4 - UCAACAAUAUCCUGGUGCUGA - 24
• Evidence: not_experimental

Mature oha-miR-338-3p

• Accession: MIMAT0036904
• Description: Ophiophagus hannah oha-miR-338-3p mature miRNA
• Sequence: 44 - UCCAGCAUCAGUGAUUUUGUUGA - 66
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656