Stem-loop bta-mir-181a-2

Accession

MI0004757

Description

Bos taurus bta-mir-181a-2 precursor miRNA

Literature search

33 open access papers mention bta-mir-181a-2
(245 sentences)

Sequence

795630 reads, 8671 reads per million, 78 experiments

ugccagggccaggacccagucuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUUugggauuugaaaaaaccaccgaccguugacuguaccuuggguuccuua
.....(((......)))........(((((.(((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))).))))).

Structure

ugccagggccaggacccagucuuca     c       A   U      CU       A    ggga 
                         gagga uccaagg ACA UCAACG  GUCGGUG GUUu    u
                         ||||| ||||||| ||| ||||||  ||||||| ||||    u
                         uuccu ggguucc ugu aguugc  cagccac caaa    u
------------------------a     u       a   c      --       -    aaag 

Annotation confidence Not enough data

Genome context

chr11: 95966066-95966175 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181a-2

Mature bta-miR-181a

• Accession: MIMAT0003543
• Description: Bos taurus bta-miR-181a mature miRNA
• Sequence: 39 - AACAUUCAACGCUGUCGGUGAGUU - 62
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103