Stem-loop bta-mir-181a-2

Accession

MI0004757

Description

Bos taurus bta-mir-181a-2 precursor miRNA

Literature search

39 open access papers mention bta-mir-181a-2
(253 sentences)

Sequence

23079877 reads, 14529.0 reads per million, 321 experiments

ugccagggccaggacccagucuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUUUgggauuugaaaaaACCACCGACCGUUGACUGUACCuuggguuccuua
.....(((......)))........(((((.(((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))).))))).

Structure

ugccagggccaggacccagucuuca     c       A   U      CU       A    ggga 
                         gagga uccaagg ACA UCAACG  GUCGGUG GUUU    u
                         ||||| ||||||| ||| ||||||  ||||||| ||||    u
                         uuccu ggguuCC UGU AGUUGC  CAGCCAC CAaa    u
------------------------a     u       A   C      --       -    aaag 

Annotation confidence High

Genome context

11: 95708973-95709082 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181a-2

Mature bta-miR-181a-5p

• Accession: MIMAT0003543
• Description: Bos taurus bta-miR-181a-5p mature miRNA
• Sequence: 39 - AACAUUCAACGCUGUCGGUGAGUUU - 63
• Evidence: experimental ; cloned [2]

Mature bta-miR-181a-2-3p

• Accession: MIMAT0050782
• Description: Bos taurus bta-miR-181a-2-3p mature miRNA
• Sequence: 77 - ACCACCGACCGUUGACUGUACC - 98
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103