Stem-loop bta-mir-181b-2

Accession

MI0005013

Description

Bos taurus bta-mir-181b-2 precursor miRNA

Literature search

23 open access papers mention bta-mir-181b-2
(60 sentences)

Sequence

38777 reads, 395 reads per million, 76 experiments

cugauggcugcacucAACAUUCAUUGCUGUCGGUGGGUUugacuuugaaucaacucacugaucaaugaauguaaacugcggaccaaaca
....((((((((....((((((((((..(((((((((((.((.......)))))))))))))))))))))))....))))).)))....

Structure

cuga   -     cucA          CU           u  cu 
    ugg cugca    ACAUUCAUUG  GUCGGUGGGUU ga  u
    ||| |||||    ||||||||||  ||||||||||| ||  u
    acc ggcgu    uguaaguaac  uagucacucaa cu  g
acaa   a     caaa          --           -  aa 

Annotation confidence Not enough data

Genome context

chr11: 95967281-95967369 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181b-2

Mature bta-miR-181b

• Accession: MIMAT0003793
• Description: Bos taurus bta-miR-181b mature miRNA
• Sequence: 16 - AACAUUCAUUGCUGUCGGUGGGUU - 39
• Evidence: experimental ; cloned [1,3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43