Stem-loop bta-mir-132

Accession

MI0005028

Description

Bos taurus bta-mir-132 precursor miRNA

Literature search

145 open access papers mention bta-mir-132
(593 sentences)

Sequence

115166 reads, 161.0 reads per million, 316 experiments

ccgcccccgcgucuccagggcaACCGUGGCUUUCGAUUGUUACUgugggaaccggaggUAACAGUCUACAGCCAUGGUCGccccgcagcacgcccacgcgc
.(((....((((((.(.((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).)))).).)).))))....))).

Structure

c   cccc    -  c a    a         UUC          -g   g 
 cgc    gcgu cu c gggc ACCGUGGCU   GAUUGUUACU  ugg  
 |||    |||| || | |||| |||||||||   ||||||||||  ||| a
 gcg    cgca ga g cccG UGGUACCGA   CUGACAAUgg  gcc  
c   cacc    c  c c    C         CAU          ag   a 

Annotation confidence High

Genome context

19: 23070707-23070807 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-132

Mature bta-miR-132-5p

• Accession: MIMAT0060952
• Description: Bos taurus bta-miR-132-5p mature miRNA
• Sequence: 23 - ACCGUGGCUUUCGAUUGUUACU - 44
• Evidence: experimental ; cloned [1]

Mature bta-miR-132-3p

• Accession: MIMAT0003812
• Description: Bos taurus bta-miR-132-3p mature miRNA
• Sequence: 59 - UAACAGUCUACAGCCAUGGUCG - 80
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43