Stem-loop bta-mir-34b

Accession

MI0004763

Description

Bos taurus bta-mir-34b precursor miRNA

Literature search

9 open access papers mention bta-mir-34b
(64 sentences)

Sequence

58 reads, 11 reads per million, 29 experiments

gugcucgguuuguAGGCAGUGUAAUUAGCUGAUUGuacucucaugcuuacaaucacuaguuccacugccaucaaaacaaggcac
(((((..((((...(((((((.((((((.((((((((..(....)..)))))))))))))).)))))))....))))..)))))

Structure

     cg    -guA       U      C        cu u 
gugcu  guuu    GGCAGUG AAUUAG UGAUUGua  c c
|||||  ||||    ||||||| |||||| ||||||||  |  
cacgg  caaa    ccgucac uugauc acuaacau  g a
     aa    acua       c      -        uc u 

Annotation confidence High

Genome context

chr15: 22281681-22281764 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-34b

Mature bta-miR-34b

• Accession: MIMAT0003549
• Description: Bos taurus bta-miR-34b mature miRNA
• Sequence: 14 - AGGCAGUGUAAUUAGCUGAUUG - 35
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43