Stem-loop bta-mir-26b

Accession

MI0004745

Description

Bos taurus bta-mir-26b precursor miRNA mir-26

Gene
family

RF00244; mir-26

Literature search

18 open access papers mention bta-mir-26b
(35 sentences)

Sequence

162340 reads, 1794 reads per million, 77 experiments

ugcccgggacccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagccuguucuccauuacuuggcucgggggccggugccc
.((((((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..)))).))..

Structure

-u  -    ga   -   U        UC           u ug 
  gc ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
  || ||||  ||| ||| ||||||||  ||||||||||| |   
  cg ggcc  ggg ucg guucauua  ucuuguccgac c  u
cc  u    gg   c   -        cc           - ug 

Annotation confidence Medium

Genome context

chr2: 107511785-107511869 [+]

Mature bta-miR-26b

• Accession: MIMAT0003531
• Description: Bos taurus bta-miR-26b mature miRNA
• Sequence: 15 - UUCAAGUAAUUCAGGAUAGGUU - 36
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343