Stem-loop bta-mir-499

Accession

MI0004750

Description

Bos taurus bta-mir-499 precursor miRNA mir-499

Gene
family

RF00745; mir-499

Literature search

58 open access papers mention bta-mir-499
(338 sentences)

Sequence

124388 reads, 102.0 reads per million, 309 experiments

gggcgggcggccgUUAAGACUUGCAGUGAUGUUUAacuccucuccacgugAACAUCACAGCAAGUCUGUGCUgcuucccguccccacgcugccugggcagggu
(((((((.(((.((..((((((((.((((((((((.............)))))))))).))))))))..)).))).)))))))..((.((((....)))).))

Structure

--------------------       c   c  UA        A          acucc 
                    gggcggg ggc gU  AGACUUGC GUGAUGUUUA     u
                    ||||||| ||| ||  |||||||| ||||||||||     c
                    ccugccc ucg CG  UCUGAACG CACUACAAgu     u
ugggacggguccgucgcacc       u   U  UG        A          gcacc 

Annotation confidence High

Genome context

13: 64292583-64292685 [+]

Mature bta-miR-499-5p

• Accession: MIMAT0003536
• Description: Bos taurus bta-miR-499-5p mature miRNA
• Sequence: 14 - UUAAGACUUGCAGUGAUGUUUA - 35
• Evidence: experimental ; cloned [1]

Mature bta-miR-499-3p

• Accession: MIMAT0050781
• Description: Bos taurus bta-miR-499-3p mature miRNA
• Sequence: 51 - AACAUCACAGCAAGUCUGUGCU - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43