Stem-loop bta-mir-26a-2

Accession

MI0004731

Description

Bos taurus bta-mir-26a-2 precursor miRNA mir-26

Gene
family

RF00244; mir-26

Literature search

47 open access papers mention bta-mir-26a-2
(198 sentences)

Sequence

136564851 reads, 69009.0 reads per million, 321 experiments

ggcuguggcuggaUUCAAGUAAUCCAGGAUAGGCUguuuccaucugugaggCCUAUUCUUGAUUACUUGUUUCuggaggcagcu
((((((..(((((..(((((((((.((((((((((..............)))))))))).)))))))))..)))))..))))))

Structure

      gg     UU         C          guuucc 
ggcugu  cugga  CAAGUAAUC AGGAUAGGCU      a
||||||  |||||  ||||||||| ||||||||||       
ucgacg  gguCU  GUUCAUUAG UCUUAUCCgg      u
      ga     UU         U          aguguc 

Annotation confidence High

Genome context

5: 55652073-55652156 [+]

Mature bta-miR-26a-5p

• Accession: MIMAT0003516
• Description: Bos taurus bta-miR-26a-5p mature miRNA
• Sequence: 14 - UUCAAGUAAUCCAGGAUAGGCU - 35
• Evidence: experimental ; cloned [2-3]

Mature bta-miR-26a-2-3p

• Accession: MIMAT0060926
• Description: Bos taurus bta-miR-26a-2-3p mature miRNA
• Sequence: 52 - CCUAUUCUUGAUUACUUGUUUC - 73
• Evidence: experimental ; unknown

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343