Stem-loop bta-mir-139

Accession

MI0005009

Description

Bos taurus bta-mir-139 precursor miRNA

Literature search

64 open access papers mention bta-mir-139
(413 sentences)

Sequence

919630 reads, 444.0 reads per million, 317 experiments

guguacUCUACAGUGCACGUGUCUCCAGUguggcucggaggcUGGAGACGCGGCCCUGUUGGAGUaac
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))))..

Structure

gug       -   U  A            g gg 
   uacUCUA CAG GC CGUGUCUCCAGU u  c
   ||||||| ||| || |||||||||||| |  u
   aUGAGGU GUC CG GCGCAGAGGUcg a  c
-ca       U   C  -            g gg 

Annotation confidence High

Genome context

15: 52174693-52174760 [-]

Mature bta-miR-139-5p

• Accession: MIMAT0003788
• Description: Bos taurus bta-miR-139-5p mature miRNA
• Sequence: 7 - UCUACAGUGCACGUGUCUCCAGU - 29
• Evidence: experimental ; cloned [1]

Mature bta-miR-139-3p

• Accession: MIMAT0060945
• Description: Bos taurus bta-miR-139-3p mature miRNA
• Sequence: 43 - UGGAGACGCGGCCCUGUUGGAGU - 65
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43