Stem-loop bta-mir-139

Accession

MI0005009

Description

Bos taurus bta-mir-139 precursor miRNA

Literature search

4 open access papers mention bta-mir-139
(108 sentences)

Sequence

3766 reads, 52 reads per million, 66 experiments

guguacUCUACAGUGCACGUGUCUCCAGUguggcucggaggcuggagacgcggcccuguuggaguaac
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))))..

Structure

gug       -   U  A            g gg 
   uacUCUA CAG GC CGUGUCUCCAGU u  c
   ||||||| ||| || |||||||||||| |  u
   augaggu guc cg gcgcagaggucg a  c
-ca       u   c  -            g gg 

Annotation confidence High

Genome context

chr15: 53212535-53212602 [-]

Mature bta-miR-139

• Accession: MIMAT0003788
• Description: Bos taurus bta-miR-139 mature miRNA
• Sequence: 7 - UCUACAGUGCACGUGUCUCCAGU - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43