Stem-loop bta-mir-532

Accession

MI0005061

Description

Bos taurus bta-mir-532 precursor miRNA mir-532

Gene
family

RF04284; mir-532

Literature search

24 open access papers mention bta-mir-532
(126 sentences)

Sequence

1769271 reads, 659.0 reads per million, 320 experiments

gacuugcuuucucucuuaCAUGCCUUGAGUGUAGGACCGUuggcaucuuaauuacCCUCCCACACCCAAGGCUUGCAggagagcca
..........(((((((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)))))))...

Structure

gacuugcuuu       a  U      A    A   CC  uggca 
          cucucuu CA GCCUUG GUGU GGA  GU     u
          ||||||| || |||||| |||| |||  ||     c
          gagaggA GU CGGAAC CACA CCU  ca     u
-------acc       C  U      C    C   CC  uuaau 

Annotation confidence High

Genome context

X: 87724730-87724815 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-532

Mature bta-miR-532-5p

• Accession: MIMAT0003848
• Description: Bos taurus bta-miR-532-5p mature miRNA
• Sequence: 19 - CAUGCCUUGAGUGUAGGACCGU - 40
• Evidence: experimental ; cloned [1]

Mature bta-miR-532-3p

• Accession: MIMAT0060968
• Description: Bos taurus bta-miR-532-3p mature miRNA
• Sequence: 56 - CCUCCCACACCCAAGGCUUGCA - 77
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43