Stem-loop bta-mir-186

Accession

MI0005033

Description

Bos taurus bta-mir-186 precursor miRNA mir-186

Gene
family

RF00697; mir-186

Literature search

6 open access papers mention bta-mir-186
(14 sentences)

Sequence

393872 reads, 6446 reads per million, 78 experiments

ugcuuauaacuuucCAAAGAAUUCUCCUUUUGGGCUuucugauuuuauuuuaagcccaaaggugaauuuuuugggaaguuugagcu
.(((((.(((((((((((((((((.(((((.((((((..............))))))))))).)))))))))))))))))))))).

Structure

u     u                 U     U      ucugau 
 gcuua aacuuucCAAAGAAUUC CCUUU GGGCUu      u
 ||||| ||||||||||||||||| ||||| ||||||       
 cgagu uugaaggguuuuuuaag ggaaa cccgaa      u
u     -                 u     -      uuuuau 

Annotation confidence High

Genome context

chr3: 74749203-74749288 [+]

Mature bta-miR-186

• Accession: MIMAT0003818
• Description: Bos taurus bta-miR-186 mature miRNA
• Sequence: 15 - CAAAGAAUUCUCCUUUUGGGCU - 36
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343