Stem-loop bta-mir-107

Accession

MI0005006

Description

Bos taurus bta-mir-107 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

12 open access papers mention bta-mir-107
(23 sentences)

Sequence

114480 reads, 633 reads per million, 77 experiments

cucucugcuuucagcuucuuuacaguguugccuuguggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagcacaga
.(((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))

Structure

c   c      --c    u  u           c   u   a 
 ucu ugcuuu   agcu cu uacaguguugc uug ggc u
 ||| ||||||   |||| || ||||||||||| ||| ||| g
 aga acgaaa   UCGG GA AUGUUACGACG Aac uug g
-   c      CUA    -  C           -   -   a 

Annotation confidence High

Genome context

chr26: 11348565-11348645 [-]

Mature bta-miR-107

• Accession: MIMAT0003785
• Description: Bos taurus bta-miR-107 mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUC - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43