Stem-loop bta-mir-487b

Accession

MI0005060

Description

Bos taurus bta-mir-487b precursor miRNA

Literature search

21 open access papers mention bta-mir-487b
(38 sentences)

Sequence

152967 reads, 104.0 reads per million, 310 experiments

uugguacuuggagAGUGGUUAUCCCUGUCCUGUUCguuuuacucaugucgAAUCGUACAGGGUCAUCCACUUuuucaguaucaa
.(((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))))).

Structure

u       u         UUAU      C U     uuuua 
 ugguacu ggagAGUGG    CCCUGU C GUUCg     c
 ||||||| |||||||||    |||||| | |||||      
 acuauga uuuUUCACC    GGGACA G UAAgc     u
a       c         UACU      U C     uguac 

Annotation confidence High

Genome context

21: 65934193-65934276 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from bta-mir-487b

Mature bta-miR-487b-5p

• Accession: MIMAT0050798
• Description: Bos taurus bta-miR-487b-5p mature miRNA
• Sequence: 14 - AGUGGUUAUCCCUGUCCUGUUC - 35
• Evidence: experimental ; cloned [1]

Mature bta-miR-487b-3p

• Accession: MIMAT0003847
• Description: Bos taurus bta-miR-487b-3p mature miRNA
• Sequence: 51 - AAUCGUACAGGGUCAUCCACUU - 72
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43