Stem-loop bta-mir-31

Accession

MI0004762

Description

Bos taurus bta-mir-31 precursor miRNA

Literature search

154 open access papers mention bta-mir-31
(699 sentences)

Sequence

850411 reads, 290.0 reads per million, 300 experiments

uccuguaacuuggaacuggagaggAGGCAAGAUGCUGGCAUAGCUGUugaacugcgaaccUGCUAUGCCAACAUAUUGCCAUCUcucuuguccg
...........(((.(.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).)))).

Structure

uccuguaacuu   a u       A     G   C         -U   gaa 
           gga c ggagagg GGCAA AUG UGGCAUAGC  GUu   c
           ||| | ||||||| ||||| ||| |||||||||  |||    
           ccu g ucucUCU CCGUU UAC ACCGUAUCG  caa   u
----------g   - u       A     A   A         Uc   gcg 

Annotation confidence High

Genome context

8: 22502362-22502455 [+]

Mature bta-miR-31-5p

• Accession: MIMAT0003548
• Description: Bos taurus bta-miR-31-5p mature miRNA
• Sequence: 25 - AGGCAAGAUGCUGGCAUAGCUGU - 47
• Evidence: experimental ; cloned [1]

Mature bta-miR-31-3p

• Accession: MIMAT0060940
• Description: Bos taurus bta-miR-31-3p mature miRNA
• Sequence: 61 - UGCUAUGCCAACAUAUUGCCAUCU - 84
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43