Stem-loop bta-mir-31

Accession

MI0004762

Description

Bos taurus bta-mir-31 precursor miRNA

Literature search

12 open access papers mention bta-mir-31
(44 sentences)

Sequence

28539 reads, 271 reads per million, 65 experiments

uccuguaacuuggaacuggagaggAGGCAAGAUGCUGGCAUAGCUguugaacugcgaaccugcuaugccaacauauugccaucucucuuguccg
...........(((.(.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).)))).

Structure

uccuguaacuu   a u       A     G   C         -U   gaa 
           gga c ggagagg GGCAA AUG UGGCAUAGC  guu   c
           ||| | ||||||| ||||| ||| |||||||||  |||    
           ccu g ucucucu ccguu uac accguaucg  caa   u
----------g   - u       a     a   a         uc   gcg 

Annotation confidence High

Genome context

chr8: 22619494-22619587 [+]

Mature bta-miR-31

• Accession: MIMAT0003548
• Description: Bos taurus bta-miR-31 mature miRNA
• Sequence: 25 - AGGCAAGAUGCUGGCAUAGCU - 45
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43