Stem-loop bta-mir-181c

Accession

MI0005032

Description

Bos taurus bta-mir-181c precursor miRNA

Literature search

65 open access papers mention bta-mir-181c
(124 sentences)

Sequence

547856 reads, 551.0 reads per million, 317 experiments

uugccaaggguuugggggAACAUUCAACCUGUCGGUGAGUUugggcagcucaggcaaACCAUCGACCGUUGAGUGGACCccgaggccuggaacugcc
...(((.((.(((((((...((((((((..(((((((.(((((...........)))))))))))).))))))))..))))))).))))).......

Structure

----uug   a  g       gAA        CU       A     ggca 
       cca gg uuugggg   CAUUCAAC  GUCGGUG GUUug    g
       ||| || |||||||   ||||||||  ||||||| |||||    c
       ggu cc gagccCC   GUGAGUUG  CAGCUAC CAaac    u
ccgucaa   -  g       -AG        -C       -     ggac 

Annotation confidence High

Genome context

7: 11811457-11811553 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181c

Mature bta-miR-181c-5p

• Accession: MIMAT0003817
• Description: Bos taurus bta-miR-181c-5p mature miRNA
• Sequence: 19 - AACAUUCAACCUGUCGGUGAGUU - 41
• Evidence: experimental ; cloned [1], Array [2], qRT-PCR [2]

Mature bta-miR-181c-3p

• Accession: MIMAT0060954
• Description: Bos taurus bta-miR-181c-3p mature miRNA
• Sequence: 58 - ACCAUCGACCGUUGAGUGGACC - 79
• Evidence: experimental ; cloned [1], Array [2], qRT-PCR [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677