Stem-loop bta-mir-181c

Accession

MI0005032

Description

Bos taurus bta-mir-181c precursor miRNA

Literature search

19 open access papers mention bta-mir-181c
(59 sentences)

Sequence

36678 reads, 350 reads per million, 71 experiments

uugccaaggguuugggggAACAUUCAACCUGUCGGUGAGUUUgggcagcucaggcaaaccaucgaccguugaguggaccccgaggccuggaacugcc
...(((.((.(((((((...((((((((..(((((((.(((((...........)))))))))))).))))))))..))))))).))))).......

Structure

----uug   a  g       gAA        CU       A     ggca 
       cca gg uuugggg   CAUUCAAC  GUCGGUG GUUUg    g
       ||| || |||||||   ||||||||  ||||||| |||||    c
       ggu cc gagcccc   gugaguug  cagcuac caaac    u
ccgucaa   -  g       -ag        -c       -     ggac 

Annotation confidence High

Genome context

chr7: 12978745-12978841 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-181c

Mature bta-miR-181c

• Accession: MIMAT0003817
• Description: Bos taurus bta-miR-181c mature miRNA
• Sequence: 19 - AACAUUCAACCUGUCGGUGAGUUU - 42
• Evidence: experimental ; cloned [1], Array [2], qRT-PCR [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677