Stem-loop mse-mir-34

Accession

MI0021025

Description

Manduca sexta mse-mir-34 precursor miRNA

Sequence

aaagaagauaagguuggccgcguUGGCAGUGUGGUUAGCUGGUUGUuuaugucauaacaacagccacuagcgacacugccucugcgugcaaccuaaagcaucg
..........((((((..((((..((((((((.(((((.(((((((...(((....))))))))))))))).))))))))..))))..)))))).........

Structure

aaagaagaua      gc    uU        G     C       uua   c 
          agguug  cgcg  GGCAGUGU GUUAG UGGUUGU   ugu a
          ||||||  ||||  |||||||| ||||| |||||||   |||  
          uccaac  gcgu  ccgucaca cgauc accgaca   aca u
-gcuacgaaa      gu    cu        g     -       ---   a 

Annotation confidence Not enough data

Genome context

JH668424.1: 260678-260780 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-34

Mature mse-miR-34

• Accession: MIMAT0024475
• Description: Manduca sexta mse-miR-34 mature miRNA
• Sequence: 24 - UGGCAGUGUGGUUAGCUGGUUGU - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395