Stem-loop mdo-mir-34b

Accession

MI0023816

Description

Monodelphis domestica mdo-mir-34b precursor miRNA

Sequence

60272 reads, 2168 reads per million, 5 experiments

AGGCAGUGUAGUUAGCUGAUUGUauucuacugccuacAAUCACUAACUCCACUGCCAUC
.(((((((.((((((.((((((((..(....)..)))))))))))))).)))))))...

Structure

--A       U      C        uu u 
   GGCAGUG AGUUAG UGAUUGUa  c a
   ||||||| |||||| ||||||||  |  
   CCGUCAC UCAAUC ACUAAcau  g c
CUA       C      -        cc u 

Annotation confidence Medium

Genome context

chr4: 241889198-241889256 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-34b

Mature mdo-miR-34b-5p

• Accession: MIMAT0028588
• Description: Monodelphis domestica mdo-miR-34b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAGUUAGCUGAUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-34b-3p

• Accession: MIMAT0028589
• Description: Monodelphis domestica mdo-miR-34b-3p mature miRNA
• Sequence: 38 - AAUCACUAACUCCACUGCCAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45