Stem-loop bfl-mir-34b

Accession

MI0010512

Description

Branchiostoma floridae bfl-mir-34b precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

uauugugcgcuacagAGGCAGUGAUGUCAGUUUGUUGUgugacacgagacgacAACAACUAACAUCACUGCCAAGgaaacgc
......(((.......(((((((((((.((((((((((.(......).))))))..)))).))))))))))).......)))

Structure

uauugu   cuacagA           C    --      g ga 
      gcg       GGCAGUGAUGU AGUU  UGUUGU u  c
      |||       ||||||||||| ||||  |||||| |   
      cgc       CCGUCACUACA UCAA  Acagca a  a
------   aaagGAA           A    CA      g gc 

Annotation confidence Not enough data

Genome context

GG666486.1: 2117606-2117687 [-]

Mature bfl-miR-34b-3p

• Accession: MIMAT0010002
• Description: Branchiostoma floridae bfl-miR-34b-3p mature miRNA
• Sequence: 54 - AACAACUAACAUCACUGCCAAG - 75
• Evidence: experimental ; cloned [1], 454 [2]

Mature bfl-miR-34b-5p

• Accession: MIMAT0019174
• Description: Branchiostoma floridae bfl-miR-34b-5p mature miRNA
• Sequence: 16 - AGGCAGUGAUGUCAGUUUGUUGU - 38
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27