Stem-loop sla-mir-34a

Accession

MI0002802

Description

Saguinus labiatus sla-mir-34a precursor miRNA

Sequence

ggccggcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUugugagcaauagugaaggaagcaaucagcaaguauacugcccuagaagugcugcacguuguggggccc
((((.(((((((((((((((..(((((((((((.((((((((((.....((....)).....))))))))))))).))))))))..))))))))).))))..))..)))).

Structure

-    -g  --    -         uU        -   A          gugag  a 
 ggcc  gc  ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUu     ca u
 ||||  ||  |||| |||||||||  |||||||| ||| ||||||||||     ||  
 ccgg  ug  gcac ucgugaaga  ccgucaua gaa cgacuaacga     gu a
c    gg  uu    g         uc        u   -          aggaa  g 

Annotation confidence Not enough data

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

Unknown

Mature sla-miR-34a

• Accession: MIMAT0002500
• Description: Saguinus labiatus sla-miR-34a mature miRNA
• Sequence: 22 - UGGCAGUGUCUUAGCUGGUUGU - 43
• Evidence: not_experimental

References

1. PubMed ID: 15652478
   Phylogenetic shadowing and computational identification of human microRNA genes
   "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
   "Cell (2005) 120:21-24