miRBase entry: ppy-mir-34b

Stem-loop ppy-mir-34b

Accession

MI0014807

Description

Pongo pygmaeus ppy-mir-34b precursor miRNA

Sequence

gugcucgguuuguaggcagugucauuagcugauuguacugugaugguuaCAAUCACUAACUCCACUGCCAUcaaaacaaggcac
(((((..((((...(((((((...((((.((((((((((.....)).))))))))))))...)))))))....))))..)))))

Structure

     cg    -gua       uca    c        -  g 
gugcu  guuu    ggcagug   uuag ugauugua cu u
|||||  ||||    |||||||   |||| |||||||| || g
cacgg  caaa    CCGUCAC   AAUC ACUAACau gg a
     aa    acUA       CUC    -        u  u

Annotation confidence Not enough data

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Genome context

chr11: 108238803-108238886 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-34b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-34b

Accession	MIMAT0015741
Description	Pongo pygmaeus ppy-miR-34b mature miRNA
Sequence	50 - CAAUCACUAACUCCACUGCCAU - 71
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64