Stem-loop bbe-mir-34h

Accession

MI0026280

Description

Branchiostoma belcheri bbe-mir-34h precursor miRNA

Literature search

1 open access papers mention bbe-mir-34h
(1 sentences)

Sequence

366 reads, 101.0 reads per million, 16 experiments

agguuugguugugAGGCAGUGUGAUUAGCUUGccguuugauuaugacgucacgGCAGCUACUCGCCCUGCCCCAcaaacacaccu
((((.((..((((.(((((.((((.(((((.(((((..(((......))))))))))))).)))).))))).))))..)).))))

Structure

    u  gu    A     U    U     U     uu   ua 
aggu ug  ugug GGCAG GUGA UAGCU Gccgu  gau  u
|||| ||  |||| ||||| |||| ||||| |||||  |||   
ucca ac  acAC CCGUC CGCU AUCGA CGgca  cug  g
    c  aa    C     C    C     -     --   ca 

Annotation confidence Medium

Genome context

Unknown

Mature bbe-miR-34h-5p

• Accession: MIMAT0031731
• Description: Branchiostoma belcheri bbe-miR-34h-5p mature miRNA
• Sequence: 14 - AGGCAGUGUGAUUAGCUUG - 32
• Evidence: not_experimental

Mature bbe-miR-34h-3p

• Accession: MIMAT0058598
• Description: Branchiostoma belcheri bbe-miR-34h-3p mature miRNA
• Sequence: 54 - GCAGCUACUCGCCCUGCCCCA - 74
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500