Stem-loop cte-mir-34

Accession

MI0010060

Description

Capitella teleta cte-mir-34 precursor miRNA mir-34

Gene
family

RF00456; mir-34

Sequence

cagccacugcuuguguuucgcUGGCAGUGUGGUUAGCUGGUUGUgaauuaauagauacaacaaccacuagcucuacugccugggaaauacaaaauuauguc
..........(((((((((.(.(((((((.((((((.(((((((...............))))))))))))).))))))).).))))))))).........

Structure

cagccacugc         g U       U      C       gaauua 
          uuguguuuc c GGCAGUG GGUUAG UGGUUGU      a
          ||||||||| | ||||||| |||||| |||||||      u
          aacauaaag g ccgucau ucgauc accaaca      a
-cuguauuaa         g u       c      -       acauag 

Annotation confidence Low

Genome context

KB292771.1: 443325-443425 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cte-mir-34

Mature cte-miR-34

• Accession: MIMAT0009516
• Description: Capitella teleta cte-miR-34 mature miRNA
• Sequence: 22 - UGGCAGUGUGGUUAGCUGGUUGU - 44
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68