Stem-loop chi-mir-34a

Accession

MI0030757

Description

Capra hircus chi-mir-34a precursor miRNA

Literature search

5 open access papers mention chi-mir-34a
(9 sentences)

Sequence

ggccagcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUugugaguaauaaugcaggaagcaaucagcaaguauacugcccuagaagugcugcacguuguggg
..(((..(((((((((((((..(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))..))))))))).))))...))).

Structure

gg   -gc    -         uU        -   A          guga   a 
  cca   ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUu    gua u
  |||   |||| |||||||||  |||||||| ||| ||||||||||    |||  
  ggu   gcac ucgugaaga  ccgucaua gaa cgacuaacga    cgu a
-g   guu    g         uc        u   -          agga   a 

Annotation confidence Low

Genome context

chr16: 44326265-44326371 [+]

Mature chi-miR-34a

• Accession: MIMAT0036166
• Description: Capra hircus chi-miR-34a mature miRNA
• Sequence: 22 - UGGCAGUGUCUUAGCUGGUUGU - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40