Stem-loop dmo-mir-34

Accession

MI0009209

Description

Drosophila mojavensis dmo-mir-34 precursor miRNA

Sequence

uggcuaugcgcuuUGGCAGUGUGGUUAGCUGGUUGuguggccacuugaaaaaucacagccacuaucuucacugccgccgcgacaagc
..(((.(((((..((((((((.((.(((.((((((((................))))))))))).)).))))))))..))).)))))

Structure

ug   a  -   uu        U  U   C        uggccac 
  gcu ug cgc  UGGCAGUG GG UAG UGGUUGug       u
  ||| || |||  |||||||| || ||| ||||||||        
  cga ac gcg  gccgucac uc auc accgacac       u
--   -  a   cc        u  u   -        uaaaaag 

Annotation confidence Not enough data

Genome context

scaffold_6540: 11883371-11883457 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dmo-mir-34

Mature dmo-miR-34

• Accession: MIMAT0008656
• Description: Drosophila mojavensis dmo-miR-34 mature miRNA
• Sequence: 14 - UGGCAGUGUGGUUAGCUGGUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218