Stem-loop dgr-mir-34

Accession

MI0009170

Description

Drosophila grimshawi dgr-mir-34 precursor miRNA

Sequence

uggcuaugcgcuuUGGCAGUGUGGUUAGCUGGUUGuguggccaacugacaaaucacagccacuaucuucacugccgccgcgacaagc
..(((.(((((..((((((((.((.(((.((((((((................))))))))))).)).))))))))..))).)))))

Structure

ug   a  -   uu        U  U   C        uggccaa 
  gcu ug cgc  UGGCAGUG GG UAG UGGUUGug       c
  ||| || |||  |||||||| || ||| ||||||||        
  cga ac gcg  gccgucac uc auc accgacac       u
--   -  a   cc        u  u   -        uaaacag 

Annotation confidence Not enough data

Genome context

scaffold_14624: 2267449-2267535 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dgr-mir-34

Mature dgr-miR-34

• Accession: MIMAT0008619
• Description: Drosophila grimshawi dgr-miR-34 mature miRNA
• Sequence: 14 - UGGCAGUGUGGUUAGCUGGUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218