Accession
MI0000004
Description
Caenorhabditis elegans
cel-mir-2 precursor miRNA
Literature search
9 open access papers mention cel-mir-2
(28 sentences)
(28 sentences)
Sequence
39461
reads,
1416
reads per million, 16 experiments
uaaacaguauacagaaagcCAUCAAAGCGGUGGUUGAUGUGuugcaaauuaugacuuucaUAUCACAGCCAGCUUUGAUGUGCugccuguugcacugu
...(((((..((((..(((((((((((((((.((.((((((...((.....)).....)))))))).))).))))))))).)))..))))...)))))
...(((((..((((..(((((((((((((((.((.((((((...((.....)).....)))))))).))).))))))))).)))..))))...)))))
Structure
uaa -au aa - - G U --uug a acagu acag agc CAUCAAAGC GGU GU GAUGUG ca a ||||| |||| ||| ||||||||| ||| || |||||| || u uguca uguc uCG GUAGUUUCG CCG CA CUAUac gu u --- cgu cg U A A - uuuca a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrI: 9372768-9372865 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cel-mir-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-2-3p
| Accession | MIMAT0000004 |
| Description | Caenorhabditis elegans cel-miR-2-3p mature miRNA |
| Sequence | 61 - UAUCACAGCCAGCUUUGAUGUGC - 83 |
| Evidence |
experimental
cloned [1-4], PCR [5], 454 [6], Illumina [7,9], CLIPseq [8] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-2-5p
| Accession | MIMAT0020302 |
| Description | Caenorhabditis elegans cel-miR-2-5p mature miRNA |
| Sequence | 20 - CAUCAAAGCGGUGGUUGAUGUG - 41 |
| Evidence |
experimental
Illumina [9] |
| Database links |
|
References
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