Accession
MI0000032
Description
Caenorhabditis elegans
cel-mir-61 precursor miRNA mir-61
Gene
family?
family?
RF00848;
mir-61
Literature search
5 open access papers mention cel-mir-61
(12 sentences)
(12 sentences)
Sequence
111413
reads,
1161
reads per million, 16 experiments
uuccauuaucgcugaaccucgagaUGGGUUACGGGGCUUAGUCCUUccuccguauggcaaUGACUAGAACCGUUACUCAUCucgagguuucggugau
.......((((((((((((((((((((((.((((..((.((((.((((.......)).)).))))))..)))).))))))))))))).)))))))))
.......((((((((((((((((((((((.((((..((.((((.((((.......)).)).))))))..)))).))))))))))))).)))))))))
Structure
uuccauu - U GG U C - uc
aucgcugaa ccucgagaUGGGU ACGG CU AGUC UU cc c
||||||||| ||||||||||||| |||| || |||| || || g
uaguggcuu ggagcuCUACUCA UGCC GA UCAG aa gg u
------- u U AA - U c ua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrV: 11770060-11770156 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cel-mir-61
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-61-5p
| Accession | MIMAT0015103 |
| Description | Caenorhabditis elegans cel-miR-61-5p mature miRNA |
| Sequence | 25 - UGGGUUACGGGGCUUAGUCCUU - 46 |
| Evidence |
experimental
CLIPseq [6] |
| Database links |
|
Mature cel-miR-61-3p
| Accession | MIMAT0000033 |
| Description | Caenorhabditis elegans cel-miR-61-3p mature miRNA |
| Sequence | 61 - UGACUAGAACCGUUACUCAUC - 81 |
| Evidence |
experimental
cloned [1-3], 454 [4], Illumina [5], CLIPseq [6] |
| Database links |
|
| Predicted targets |
|
References
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