Stem-loop cbr-mir-392

Accession

MI0005432

Description

Caenorhabditis briggsae cbr-mir-392 precursor miRNA

Sequence

aaauccugcauuuaucugacaucucacauuauugaggauauaaacuaaauaaagaaaUAUCAUCGAUCAUGUGAGCUGUuagauuaucagauuu
.....(((.((..((((((((.(((((((.(((((.(((((...((......))..))))).))))).))))))).)))))))).)))))....

Structure

aaauc   c  uu        u       u     g     aaa  aa 
     cug au  aucugaca cucacau auuga gauau   cu  a
     ||| ||  |||||||| ||||||| ||||| |||||   ||   
     gac ua  uagauUGU GAGUGUA UAGCU CUAUa   ga  u
-uuua   -  -u        C       C     A     -aa  aa 

Annotation confidence Low

Genome context

chrX: 19329031-19329124 [+]

Mature cbr-miR-392

• Accession: MIMAT0004299
• Description: Caenorhabditis briggsae cbr-miR-392 mature miRNA
• Sequence: 58 - UAUCAUCGAUCAUGUGAGCUGU - 79
• Evidence: not_experimental

References

1. PubMed ID: 17174894
   Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
   "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
   "Cell (2006) 127:1193-1207