Stem-loop cbr-mir-787

Accession

MI0005420

Description

Caenorhabditis briggsae cbr-mir-787 precursor miRNA

Sequence

ccucaaaauggagaagaaggaaacuagacaaucuuacauagcucaaaauaaucugUAAGCUCGUCUUAGUUUUCCUCUccucucuaggga
(((.....(((((((((.(((((((((((...((((((...............))))))...))).)))))))).)))..))))))))).

Structure

-   caaaa      --   a        -   aau      uagcuc 
 ccu     uggaga  aga ggaaacua gac   cuuaca      a
 |||     ||||||  ||| |||||||| |||   ||||||      a
 ggg     aucucu  UCU CUUUUGAU CUG   GAAUgu      a
a   -----      cc   C        U   CUC      cuaaua 

Annotation confidence Not enough data

Genome context

chrX: 5308342-5308431 [-]

Mature cbr-miR-787

• Accession: MIMAT0004288
• Description: Caenorhabditis briggsae cbr-miR-787 mature miRNA
• Sequence: 56 - UAAGCUCGUCUUAGUUUUCCUCU - 78
• Evidence: not_experimental

References

1. PubMed ID: 17174894
   Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
   "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
   "Cell (2006) 127:1193-1207