Accession
MI0000046
Description
Caenorhabditis elegans
cel-mir-75 precursor miRNA mir-75
Gene
family?
family?
RF00828;
mir-75
Literature search
2 open access papers mention cel-mir-75
(10 sentences)
(10 sentences)
Sequence
45021
reads,
1933
reads per million, 15 experiments
uucuuguugcuuugaagaauugCAGUCGGUUGCAAGCUUAAAUAcaaauccgaauuguuaUUAAAGCUACCAACCGGCUUCAagucugaaagagcag
.......((((((..(((.(((.(((((((((..(((((.(((((((.......))).)))).)))))..))))))))).))).)))...)))))).
.......((((((..(((.(((.(((((((((..(((((.(((((((.......))).)))).)))))..))))))))).))).)))...)))))).
Structure
uucuugu -ga a C CA A - au
ugcuuu aga uug AGUCGGUUG AGCUU AAUA caa c
|||||| ||| ||| ||||||||| ||||| |||| ||| c
acgaga ucu aAC UCGGCCAAC UCGAA UUau guu g
------g aag g U CA A u aa
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrX: 2372453-2372549 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cel-mir-75
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-75-5p
| Accession | MIMAT0015108 |
| Description | Caenorhabditis elegans cel-miR-75-5p mature miRNA |
| Sequence | 23 - CAGUCGGUUGCAAGCUUAAAUA - 44 |
| Evidence |
experimental
CLIPseq [5], Illumina [6] |
| Database links |
|
Mature cel-miR-75-3p
| Accession | MIMAT0000047 |
| Description | Caenorhabditis elegans cel-miR-75-3p mature miRNA |
| Sequence | 61 - UUAAAGCUACCAACCGGCUUCA - 82 |
| Evidence |
experimental
cloned [1-2], 454 [3], Illumina [4,6], CLIPseq [5] |
| Database links |
|
| Predicted targets |
|
