Stem-loop cbr-mir-789

Accession

MI0005423

Description

Caenorhabditis briggsae cbr-mir-789 precursor miRNA

Sequence

uugcccgacuucggauucacguggucauccaggcggugcacguuaaaagauauaaauGCCCUGCCUGGGUCACCAUGUGAauagggaauacgguca
.((.(((..(((..(((((((((((.((((((((((.(((................))).)))))))))).)))))))))))...)))..))).))

Structure

u  c   ac   -gg           c          u   cguuaaa 
 ug ccg  uuc   auucacguggu auccaggcgg gca       a
 || |||  |||   ||||||||||| |||||||||| |||        
 ac ggc  aag   uaAGUGUACCA UGGGUCCGUC CGu       g
-  u   au   gga           C          C   aaauaua 

Annotation confidence Low

Genome context

chrV: 3561062-3561157 [+]

Mature cbr-miR-789

• Accession: MIMAT0004291
• Description: Caenorhabditis briggsae cbr-miR-789 mature miRNA
• Sequence: 58 - GCCCUGCCUGGGUCACCAUGUGA - 80
• Evidence: not_experimental

References

1. PubMed ID: 17174894
   Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
   "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
   "Cell (2006) 127:1193-1207