![]() |
miRBase |
![]() |
![]() |
Stem-loop sequence cel-mir-82 |
||||||
Accession | MI0000053 (change log) | |||||
Description | Caenorhabditis elegans miR-82 stem-loop | |||||
Gene family | MIPF0000154; mir-81 | |||||
Literature search |
![]()
8 open access papers mention cel-mir-82 | |||||
Stem-loop |
gaaaua -uuuu c u u a a ca 5' gguuc agcaac gguuuuc c gugaucu caga uga g ||||| |||||| ||||||| | ||||||| |||| ||| c 3' ucaag uuguug ccgaaag g uacuaga gucu gcu u -----c uauuu a u c - - aa |
|||||
Deep sequencing |
| |||||
Confidence |
Annotation confidence: high
| |||||
Genome context |
|
|||||
Clustered miRNAs |
|
|||||
Database links |
|
Mature sequence cel-miR-82-5p |
|
Accession | MIMAT0020323 |
Previous IDs | cel-miR-82* |
Sequence |
22 - cgguuuucucugugaucuacaga - 44 |
Deep sequencing | 1709 reads, 14 experiments |
Evidence | experimental; Illumina [6] |
Database links |
|
Mature sequence cel-miR-82-3p |
|
Accession | MIMAT0000055 |
Previous IDs | cel-miR-82 |
Sequence |
61 - ugagaucaucgugaaagccagu - 82 |
Deep sequencing | 4110051 reads, 17 experiments |
Evidence | experimental; cloned [1-2], 454 [3], Illumina [4,6], CLIPseq [5] |
Database links |
|
Predicted targets |
|
References |
|
1 |
PMID:11679671
"An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans"
Science. 294:858-862(2001).
|
2 |
PMID:12672692
"The microRNAs of Caenorhabditis elegans"
Genes Dev. 17:991-1008(2003).
|
3 |
PMID:17174894
"Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans"
Cell. 127:1193-1207(2006).
|
4 | |
5 |
PMID:20062054
"Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans"
Nat Struct Mol Biol. 17:173-179(2010).
|
6 |