miRBase entry: hsa-mir-30a

Stem-loop hsa-mir-30a


Accession
MI0000088
Symbol
HGNC: MIR30A
Description
Homo sapiens hsa-mir-30a precursor miRNA

Summary
Caution, this is an AI generated summary based on literature. This may have errors. ?

MIR30A is a microRNA encoded on human chromosome 6, along with its clustered pair MIR30C2, and is a member of the miR-30 family, which is distributed across three different chromosomes [PMC4873751]. This microRNA plays a significant role in cellular processes, as evidenced by the fact that targeting MIR30A can decrease autophagy in primary LMC cells and increase their sensitivity to the drug Imatinib [PMC6888542]. The human MIR30A loop sequence (MIR30Ahsp) is utilized for its ability to express high levels of siRNAs when used in shRNAmirs [PMC2737240]. Furthermore, the inhibition of exosomal MIR30A expression has been shown to reduce the protective effects of EGCG during hypoxic injury [PMC7054242]. In gene expression studies, MIR30A has been identified as one of several genes with downregulated expression when 191 genes were upregulated and 284 were downregulated in a specific context [PMC7260613]. Additionally, MIR30A has been found to target specific genes such as DC-STAMP which are unique to osteoclast-specific fusogens [PMC7504439].

Literature search
486 open access papers mention hsa-mir-30a
(2535 sentences)

Sequence

4160938 reads, 5468 reads per million, 158 experiments
gcgacUGUAAACAUCCUCGACUGGAAGcugugaagccacagaugggCUUUCAGUCGGAUGUUUGCAGCugc
(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).)))

Structure
   a            UC           -----   a 
gcg cUGUAAACAUCC  GACUGGAAGcu     gug a
||| ||||||||||||  |||||||||||     |||  
cgu GACGUUUGUAGG  CUGACUUUCgg     cac g
   C            --           guaga   c 


Annotation confidence High
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Comments
The mature sequences miR-30 [1] and miR-97 [2] appear to originate from the same precursor. Subsequent data confirm that both arms of the precursor appear to give rise to mature miRNA sequences (Pfeffer S, pers. comm.). Landgraf et al. later showed that the 5' product is the predominant one [5]. Related miRNAs are processed from the 5' arms of other precursor loci (mir-30b, MIR:MI0000441; mir-30c-1, MIR:MI0000736; mir-30c-2, MIR:MI0000254; mir-30d, MIR:MI0000255; mir-30e, MI0000749).

Genome context
chr6: 71403551-71403621 [-]

Disease association
hsa-mir-30a is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-30a-5p

Accession MIMAT0000087
Description Homo sapiens hsa-miR-30a-5p mature miRNA
Sequence 6 - UGUAAACAUCCUCGACUGGAAG - 27
Evidence experimental
cloned [2,4-6]
Database links
Predicted targets

Mature hsa-miR-30a-3p

Accession MIMAT0000088
Description Homo sapiens hsa-miR-30a-3p mature miRNA
Sequence 47 - CUUUCAGUCGGAUGUUUGCAGC - 68
Evidence experimental
cloned [1,4-5], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 11679670
    Identification of novel genes coding for small expressed RNAs
    "Lagos-Quintana M, Rauhut R, Lendeckel W, Tuschl T"
    "Science (2001) 294:853-858

  2. PubMed ID: 14573789
    Reduced accumulation of specific microRNAs in colorectal neoplasia
    "Michael MZ, O' Connor SM, van Holst Pellekaan NG, Young GP, James RJ"
    "Mol Cancer Res (2003) 1:882-891

  3. PubMed ID: 15325244
    Altered expression profiles of microRNAs during TPA-induced differentiation of HL-60 cells
    "Kasashima K, Nakamura Y, Kozu T"
    "Biochem Biophys Res Commun (2004) 322:403-410

  4. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  5. PubMed ID: 17616659
    Patterns of known and novel small RNAs in human cervical cancer
    "Lui WO, Pourmand N, Patterson BK, Fire A"
    "Cancer Res (2007) 67:6031-6043

  6. PubMed ID: 11914277
    miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs
    "Mourelatos Z, Dostie J, Paushkin S, Sharma A, Charroux B, Abel L, Rappsilber J, Mann M, Dreyfuss G"
    "Genes Dev (2002) 16:720-728