Patterns of known and novel small RNAs in human cervical cancer |
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PubMed ID | 17616659 |
Authors | "Lui WO, Pourmand N, Patterson BK, Fire A" |
Journal | "Cancer Res |
Volume | 67 |
Pages | 6031-6043 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
hsa-let-7a-1 | MI0000060 | 46519 | chr9 | 94175957 | 94176036 | + | High |
hsa-let-7a-2 | MI0000061 | 46265 | chr11 | 122146522 | 122146593 | - | High |
hsa-let-7a-3 | MI0000062 | 46706 | chr22 | 46112749 | 46112822 | + | High |
hsa-let-7b | MI0000063 | 27396 | chr22 | 46113686 | 46113768 | + | High |
hsa-let-7c | MI0000064 | 15711 | chr21 | 16539828 | 16539911 | + | High |
hsa-let-7d | MI0000065 | 4366 | chr9 | 94178834 | 94178920 | + | High |
hsa-let-7e | MI0000066 | 5118 | chr19 | 51692786 | 51692864 | + | High |
hsa-let-7f-1 | MI0000067 | 65280 | chr9 | 94176347 | 94176433 | + | High |
hsa-let-7f-2 | MI0000068 | 65395 | chrX | 53557192 | 53557274 | - | High |
hsa-mir-15a | MI0000069 | 3371 | chr13 | 50049119 | 50049201 | - | High |
hsa-mir-16-1 | MI0000070 | 10398 | chr13 | 50048973 | 50049061 | - | High |
hsa-mir-17 | MI0000071 | 12840 | chr13 | 91350605 | 91350688 | + | High |
hsa-mir-18a | MI0000072 | 8032 | chr13 | 91350751 | 91350821 | + | High |
hsa-mir-19a | MI0000073 | 9302 | chr13 | 91350891 | 91350972 | + | High |
hsa-mir-19b-1 | MI0000074 | 12712 | chr13 | 91351192 | 91351278 | + | High |
hsa-mir-19b-2 | MI0000075 | 12558 | chrX | 134169671 | 134169766 | - | High |
hsa-mir-20a | MI0000076 | 6826 | chr13 | 91351065 | 91351135 | + | High |
hsa-mir-21 | MI0000077 | 28570 | chr17 | 59841266 | 59841337 | + | High |
hsa-mir-22 | MI0000078 | 2726 | chr17 | 1713903 | 1713987 | - | High |
hsa-mir-23a | MI0000079 | 5463 | chr19 | 13836587 | 13836659 | - | High |
hsa-mir-24-1 | MI0000080 | 2988 | chr9 | 95086021 | 95086088 | + | High |
hsa-mir-24-2 | MI0000081 | 3119 | chr19 | 13836287 | 13836359 | - | High |
hsa-mir-25 | MI0000082 | 3994 | chr7 | 100093560 | 100093643 | - | High |
hsa-mir-26a-1 | MI0000083 | 11638 | chr3 | 37969404 | 37969480 | + | High |
hsa-mir-26b | MI0000084 | 3586 | chr2 | 218402646 | 218402722 | + | High |
hsa-mir-27a | MI0000085 | 3484 | chr19 | 13836440 | 13836517 | - | High |
hsa-mir-28 | MI0000086 | 1128 | chr3 | 188688781 | 188688866 | + | High |
hsa-mir-29a | MI0000087 | 9609 | chr7 | 130876747 | 130876810 | - | High |
hsa-mir-30a | MI0000088 | 5468 | chr6 | 71403551 | 71403621 | - | High |
hsa-mir-31 | MI0000089 | 2296 | chr9 | 21512115 | 21512185 | - | High |
hsa-mir-92a-1 | MI0000093 | 7474 | chr13 | 91351314 | 91351391 | + | High |
hsa-mir-92a-2 | MI0000094 | 7101 | chrX | 134169538 | 134169612 | - | High |
hsa-mir-93 | MI0000095 | 1906 | chr7 | 100093768 | 100093847 | - | High |
hsa-mir-96 | MI0000098 | 613 | chr7 | 129774692 | 129774769 | - | High |
hsa-mir-98 | MI0000100 | 616 | chrX | 53556223 | 53556341 | - | High |
hsa-mir-99a | MI0000101 | 1967 | chr21 | 16539089 | 16539169 | + | High |
hsa-mir-100 | MI0000102 | 1446 | chr11 | 122152229 | 122152308 | - | High |
hsa-mir-101-1 | MI0000103 | 3806 | chr1 | 65058434 | 65058508 | - | High |
hsa-mir-29b-1 | MI0000105 | 2447 | chr7 | 130877459 | 130877539 | - | High |
hsa-mir-29b-2 | MI0000107 | 2264 | chr1 | 207802443 | 207802523 | - | High |
hsa-mir-103a-2 | MI0000108 | 15897 | chr20 | 3917494 | 3917571 | + | High |
hsa-mir-103a-1 | MI0000109 | 15862 | chr5 | 168560896 | 168560973 | - | High |
hsa-mir-16-2 | MI0000115 | 10575 | chr3 | 160404745 | 160404825 | + | High |
hsa-mir-196a-1 | MI0000238 | 1109 | chr17 | 48632490 | 48632559 | - | High |
hsa-mir-197 | MI0000239 | 379 | chr1 | 109598893 | 109598967 | + | High |
hsa-mir-30c-2 | MI0000254 | 1554 | chr6 | 71376960 | 71377031 | - | High |
hsa-mir-30d | MI0000255 | 2889 | chr8 | 134804876 | 134804945 | - | High |
hsa-mir-7-1 | MI0000263 | 6676 | chr9 | 83969748 | 83969857 | - | High |
hsa-mir-7-2 | MI0000264 | 6424 | chr15 | 88611825 | 88611934 | + | High |
hsa-mir-7-3 | MI0000265 | 6734 | chr19 | 4770670 | 4770779 | + | - |
hsa-mir-10a | MI0000266 | 4312 | chr17 | 48579838 | 48579947 | - | High |
hsa-mir-10b | MI0000267 | 3750 | chr2 | 176150303 | 176150412 | + | - |
hsa-mir-34a | MI0000268 | 442 | chr1 | 9151668 | 9151777 | - | High |
hsa-mir-181a-2 | MI0000269 | 4211 | chr9 | 124692442 | 124692551 | + | High |
hsa-mir-181b-1 | MI0000270 | 1441 | chr1 | 198858873 | 198858982 | - | High |
hsa-mir-182 | MI0000272 | 521 | chr7 | 129770383 | 129770492 | - | High |
hsa-mir-183 | MI0000273 | 635 | chr7 | 129774905 | 129775014 | - | High |
hsa-mir-196a-2 | MI0000279 | 1227 | chr12 | 53991738 | 53991847 | + | High |
hsa-mir-205 | MI0000285 | 7630 | chr1 | 209432133 | 209432242 | + | High |
hsa-mir-210 | MI0000286 | 423 | chr11 | 568089 | 568198 | - | High |
hsa-mir-181a-1 | MI0000289 | 4186 | chr1 | 198859044 | 198859153 | - | High |
hsa-mir-218-1 | MI0000294 | 1697 | chr4 | 20528275 | 20528384 | + | High |
hsa-mir-218-2 | MI0000295 | 1561 | chr5 | 168768146 | 168768255 | - | High |
hsa-mir-221 | MI0000298 | 5088 | chrX | 45746157 | 45746266 | - | High |
hsa-mir-222 | MI0000299 | 4867 | chrX | 45747015 | 45747124 | - | High |
hsa-mir-224 | MI0000301 | 734 | chrX | 151958578 | 151958658 | - | High |
hsa-mir-200b | MI0000342 | 1272 | chr1 | 1167104 | 1167198 | + | - |
hsa-let-7g | MI0000433 | 6904 | chr3 | 52268278 | 52268361 | - | High |
hsa-let-7i | MI0000434 | 7403 | chr12 | 62603686 | 62603769 | + | High |
hsa-mir-15b | MI0000438 | 5285 | chr3 | 160404588 | 160404685 | + | High |
hsa-mir-23b | MI0000439 | 4243 | chr9 | 95085208 | 95085304 | + | - |
hsa-mir-27b | MI0000440 | 4618 | chr9 | 95085445 | 95085541 | + | High |
hsa-mir-30b | MI0000441 | 938 | chr8 | 134800520 | 134800607 | - | High |
hsa-mir-125b-1 | MI0000446 | 5007 | chr11 | 122099757 | 122099844 | - | High |
hsa-mir-130a | MI0000448 | 2307 | chr11 | 57641198 | 57641286 | + | High |
hsa-mir-132 | MI0000449 | 1698 | chr17 | 2049908 | 2050008 | - | High |
hsa-mir-138-2 | MI0000455 | 512 | chr16 | 56858518 | 56858601 | + | High |
hsa-mir-140 | MI0000456 | 8526 | chr16 | 69933081 | 69933180 | + | High |
hsa-mir-141 | MI0000457 | 931 | chr12 | 6964097 | 6964191 | + | High |
hsa-mir-152 | MI0000462 | 813 | chr17 | 48037161 | 48037247 | - | High |
hsa-mir-191 | MI0000465 | 8115 | chr3 | 49020618 | 49020709 | - | High |
hsa-mir-125a | MI0000469 | 5127 | chr19 | 51693254 | 51693339 | + | High |
hsa-mir-125b-2 | MI0000470 | 5102 | chr21 | 16590237 | 16590325 | + | High |
hsa-mir-138-1 | MI0000476 | 800 | chr3 | 44114212 | 44114310 | + | High |
hsa-mir-149 | MI0000478 | 225 | chr2 | 240456001 | 240456089 | + | High |
hsa-mir-185 | MI0000482 | 2631 | chr22 | 20033139 | 20033220 | + | High |
hsa-mir-186 | MI0000483 | 4834 | chr1 | 71067631 | 71067716 | - | High |
hsa-mir-193a | MI0000487 | 1104 | chr17 | 31559996 | 31560083 | + | High |
hsa-mir-320a | MI0000542 | 6059 | chr8 | 22244966 | 22245037 | - | High |
hsa-mir-200c | MI0000650 | 2318 | chr12 | 6963699 | 6963766 | + | High |
hsa-mir-155 | MI0000681 | 459 | chr21 | 25573980 | 25574044 | + | High |
hsa-mir-181b-2 | MI0000683 | 1507 | chr9 | 124693710 | 124693798 | + | High |
hsa-mir-106b | MI0000734 | 2518 | chr7 | 100093993 | 100094074 | - | High |
hsa-mir-29c | MI0000735 | 2141 | chr1 | 207801852 | 207801939 | - | High |
hsa-mir-30c-1 | MI0000736 | 1532 | chr1 | 40757284 | 40757372 | + | High |
hsa-mir-200a | MI0000737 | 1523 | chr1 | 1167863 | 1167952 | + | High |
hsa-mir-101-2 | MI0000739 | 3835 | chr9 | 4850297 | 4850375 | + | High |
hsa-mir-99b | MI0000746 | 1445 | chr19 | 51692612 | 51692681 | + | High |
hsa-mir-296 | MI0000747 | 139 | chr20 | 58817615 | 58817694 | - | High |
hsa-mir-130b | MI0000748 | 1850 | chr22 | 21653304 | 21653385 | + | High |
hsa-mir-30e | MI0000749 | 2874 | chr1 | 40754355 | 40754446 | + | High |
hsa-mir-26a-2 | MI0000750 | 11698 | chr12 | 57824609 | 57824692 | - | High |
hsa-mir-365a | MI0000767 | 1068 | chr16 | 14309285 | 14309371 | + | High |
hsa-mir-365b | MI0000769 | 1088 | chr17 | 31575411 | 31575521 | + | High |
hsa-mir-374a | MI0000782 | 1036 | chrX | 74287286 | 74287357 | - | High |
hsa-mir-330 | MI0000803 | 414 | chr19 | 45638994 | 45639087 | - | High |
hsa-mir-342 | MI0000805 | 887 | chr14 | 100109655 | 100109753 | + | High |
hsa-mir-151a | MI0000809 | 3662 | chr8 | 140732564 | 140732653 | - | - |
hsa-mir-135b | MI0000810 | 126 | chr1 | 205448302 | 205448398 | - | High |
hsa-mir-148b | MI0000811 | 1329 | chr12 | 54337216 | 54337314 | + | High |
hsa-mir-331 | MI0000812 | 805 | chr12 | 95308420 | 95308513 | + | - |
hsa-mir-324 | MI0000813 | 516 | chr17 | 7223297 | 7223379 | - | High |
hsa-mir-338 | MI0000814 | 385 | chr17 | 81125883 | 81125949 | - | High |
hsa-mir-335 | MI0000816 | 4193 | chr7 | 130496111 | 130496204 | + | High |
hsa-mir-196b | MI0001150 | 1494 | chr7 | 27169480 | 27169563 | - | High |
hsa-mir-423 | MI0001445 | 5810 | chr17 | 30117079 | 30117172 | + | High |
hsa-mir-424 | MI0001446 | 5350 | chrX | 134546614 | 134546711 | - | High |
hsa-mir-425 | MI0001448 | 1627 | chr3 | 49020148 | 49020234 | - | High |
hsa-mir-20b | MI0001519 | 152 | chrX | 134169809 | 134169877 | - | High |
hsa-mir-429 | MI0001641 | 318 | chr1 | 1169005 | 1169087 | + | High |
hsa-mir-452 | MI0001733 | 581 | chrX | 151959628 | 151959712 | - | High |
hsa-mir-484 | MI0002468 | 612 | chr16 | 15643294 | 15643372 | + | - |
hsa-mir-491 | MI0003126 | 67 | chr9 | 20716105 | 20716188 | + | High |
hsa-mir-193b | MI0003137 | 1060 | chr16 | 14303967 | 14304049 | + | High |
hsa-mir-522 | MI0003177 | 16 | chr19 | 53751211 | 53751297 | + | High |
hsa-mir-505 | MI0003190 | 422 | chrX | 139924148 | 139924231 | - | - |
hsa-mir-532 | MI0003205 | 406 | chrX | 50003148 | 50003238 | + | High |
hsa-mir-455 | MI0003513 | 927 | chr9 | 114209434 | 114209529 | + | - |
hsa-mir-92b | MI0003560 | 954 | chr1 | 155195177 | 155195272 | + | High |
hsa-mir-574 | MI0003581 | 1138 | chr4 | 38868032 | 38868127 | + | High |
hsa-mir-582 | MI0003589 | 523 | chr5 | 59703606 | 59703703 | - | High |
hsa-mir-584 | MI0003591 | 403 | chr5 | 149062313 | 149062409 | - | High |
hsa-mir-542 | MI0003686 | 402 | chrX | 134541341 | 134541437 | - | High |
hsa-mir-874 | MI0005532 | 152 | chr5 | 137647572 | 137647649 | - | High |
hsa-mir-708 | MI0005543 | 475 | chr11 | 79402022 | 79402109 | - | High |
hsa-mir-374b | MI0005566 | 1430 | chrX | 74218547 | 74218618 | - | High |
hsa-mir-933 | MI0005755 | 44 | chr2 | 175167633 | 175167709 | - | - |
hsa-mir-934 | MI0005756 | 11 | chrX | 136550878 | 136550960 | + | - |
hsa-mir-935 | MI0005757 | 104 | chr19 | 53982307 | 53982397 | + | - |
hsa-mir-936 | MI0005758 | 1 | chr10 | 104048089 | 104048186 | - | - |
hsa-mir-937 | MI0005759 | 23 | chr8 | 143812957 | 143813042 | - | High |
hsa-mir-938 | MI0005760 | 5 | chr10 | 29602264 | 29602346 | - | - |
hsa-mir-939 | MI0005761 | 30 | chr8 | 144394149 | 144394230 | - | - |
hsa-mir-940 | MI0005762 | 104 | chr16 | 2271747 | 2271840 | + | - |
hsa-mir-941-1 | MI0005763 | 247 | chr20 | 63919449 | 63919520 | + | High |
hsa-mir-941-2 | MI0005764 | 247 | chr20 | 63919505 | 63919576 | + | High |
hsa-mir-941-3 | MI0005765 | 247 | chr20 | 63919561 | 63919632 | + | High |
hsa-mir-941-4 | MI0005766 | 247 | chr20 | 63919756 | 63919827 | + | High |
hsa-mir-942 | MI0005767 | 124 | chr1 | 117094643 | 117094728 | + | High |
hsa-mir-943 | MI0005768 | 4 | chr4 | 1986384 | 1986477 | - | - |
hsa-mir-944 | MI0005769 | 309 | chr3 | 189829922 | 189830009 | + | - |
hsa-mir-941-5 | MI0031520 | 247 | chr20 | 63919868 | 63919939 | + | High |