Stem-loop hsa-mir-940

Accession

MI0005762

Symbol

HGNC: MIR940

Description

Homo sapiens hsa-mir-940 precursor miRNA mir-940

Gene
family

RF01023; mir-940

Literature search

96 open access papers mention hsa-mir-940
(523 sentences)

Sequence

5671 reads, 22.0 reads per million, 126 experiments

gugaggugugggcccggccccaGGAGCGGGGCCUGGGCAGCCccguguguugaggaaggAAGGCAGGGCCCCCGCUCCCCgggccugaccccac
(((.(((..((((((((.....((((((((((((.(.(..((((.........))..))..).).))).))))))))))))))))).))).)))

Structure

   a   gu        cccca         -   G G AG  --  gug 
gug ggu  gggcccgg     GGAGCGGGG CCU G C  CC  cc   u
||| |||  ||||||||     ||||||||| ||| | |  ||  ||   g
cac cca  uccgggCC     CCUCGCCCC GGG C G  gg  gg   u
   c   -g        -----         C   A G AA  aa  agu 

Annotation confidence High

Genome context

chr16: 2271747-2271840 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hsa-mir-940

Disease association

hsa-mir-940 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-940-5p

• Accession: MIMAT0050517
• Description: Homo sapiens hsa-miR-940-5p mature miRNA
• Sequence: 23 - GGAGCGGGGCCUGGGCAGCC - 42
• Evidence: experimental ; cloned [1]

Mature hsa-miR-940-3p

• Accession: MIMAT0004983
• Description: Homo sapiens hsa-miR-940-3p mature miRNA
• Sequence: 60 - AAGGCAGGGCCCCCGCUCCCC - 80
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17616659
   Patterns of known and novel small RNAs in human cervical cancer
   "Lui WO, Pourmand N, Patterson BK, Fire A"
   "Cancer Res (2007) 67:6031-6043