miRBase entry: mmu-mir-101a

Stem-loop mmu-mir-101a


Accession
MI0000148
Symbol
MGI: Mir101a
Description
Mus musculus mmu-mir-101a precursor miRNA
Gene family
MIPF0000046; mir-101

Literature search
129 open access papers mention mmu-mir-101a
(890 sentences)

Sequence

1299857 reads, 2654 reads per million, 107 experiments
aggcugcccuggcUCAGUUAUCACAGUGCUGAUGCuguccauucuaaaggUACAGUACUGUGAUAACUGAAggauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure
a       cuggc                  A    gucca 
 ggcugcc     UCAGUUAUCACAGUGCUG UGCu     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uaggA                  -    aaauc 


Annotation confidence High
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Comments
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].

Genome context
chr4: 101346945-101347027 [-]

Database links

Mature mmu-miR-101a-5p

Accession MIMAT0004526
Description Mus musculus mmu-miR-101a-5p mature miRNA
Sequence 14 - UCAGUUAUCACAGUGCUGAUGC - 35
Evidence experimental
cloned [3], Illumina [4-5]
Database links
Predicted targets

Mature mmu-miR-101a-3p

Accession MIMAT0000133
Description Mus musculus mmu-miR-101a-3p mature miRNA
Sequence 51 - UACAGUACUGUGAUAACUGAA - 71
Evidence experimental
cloned [1-3], Illumina [4-5]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12007417
    Identification of tissue-specific microRNAs from mouse
    "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
    "Curr Biol (2002) 12:735-739

  3. PubMed ID: 15538371
    A pancreatic islet-specific microRNA regulates insulin secretion
    "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
    "Nature (2004) 432:226-230

  4. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  5. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009