miRBase entry: mmu-mir-141

Stem-loop mmu-mir-141


Accession
MI0000166
Symbol
MGI: Mir141
Description
Mus musculus mmu-mir-141 precursor miRNA
Gene family
MIPF0000019; mir-8

Literature search
128 open access papers mention mmu-mir-141
(1110 sentences)

Sequence

40115 reads, 886 reads per million, 93 experiments
gggucCAUCUUCCAGUGCAGUGUUGGAugguugaaguaugaagcuccUAACACUGUCUGGUAAAGAUGGccc
(((.(((((((((((.((((((((((..(.((........)).)..))))))))))))))..))))))))))

Structure
   u       --    U          Au g  gaa 
ggg cCAUCUU  CCAG GCAGUGUUGG  g uu   g
||| |||||||  |||| ||||||||||  | ||    
ccc GGUAGAA  GGUC UGUCACAAUc  c aa   u
   -       AU    -          cu g  gua 


Annotation confidence Not enough data
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Genome context
chr6: 124717914-124717985 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-141
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-141-5p

Accession MIMAT0004533
Description Mus musculus mmu-miR-141-5p mature miRNA
Sequence 6 - CAUCUUCCAGUGCAGUGUUGGA - 27
Evidence experimental
cloned [4], Illumina [5-6]
Database links
Predicted targets

Mature mmu-miR-141-3p

Accession MIMAT0000153
Description Mus musculus mmu-miR-141-3p mature miRNA
Sequence 48 - UAACACUGUCUGGUAAAGAUGG - 69
Evidence experimental
cloned [1,3-4], Illumina [5-6]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12919684
    Embryonic stem cell-specific MicroRNAs
    "Houbaviy HB, Murray MF, Sharp PA"
    "Dev Cell (2003) 5:351-358

  3. PubMed ID: 12007417
    Identification of tissue-specific microRNAs from mouse
    "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
    "Curr Biol (2002) 12:735-739

  4. PubMed ID: 15538371
    A pancreatic islet-specific microRNA regulates insulin secretion
    "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
    "Nature (2004) 432:226-230

  5. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  6. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009