Accession
MI0000195
Description
Arabidopsis thaliana
ath-MIR162b precursor miRNA
Literature search
17 open access papers mention ath-MIR162b
(45 sentences)
(45 sentences)
Sequence
gagugaagucgcUGGAGGCAGCGGUUCAUCGAUCaauuccugugaauauuuauuuuuguuuacaaaagcaagaaucgaUCGAUAAACCUCUGCAUCCAGcgcugcuugcuc
((((.(((((((((((.((((.((((.(((((((.((((.((((((((........)))))))).......)))).))))))).)))).)))).)))))))..))))))))
((((.(((((((((((.((((.((((.(((((((.((((.((((((((........)))))))).......)))).))))))).)))).)))).)))))))..))))))))
Structure
g -- G C C a ------c uuu
gagu aagu cgcUGGA GCAG GGUU AUCGAUC auuc ugugaaua a
|||| |||| ||||||| |||| |||| ||||||| |||| ||||||||
cucg uucg gcGACCU CGUC CCAA UAGCUag uaag acauuugu u
- uc A U A c aacgaaa uuu
Annotation confidence
Not enough data
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Genome context
chr5: 7740598-7740708 [-]
Database links
Mature ath-miR162b-3p
| Accession | MIMAT0000183 |
| Description | Arabidopsis thaliana ath-miR162b-3p mature miRNA |
| Sequence | 79 - UCGAUAAACCUCUGCAUCCAG - 99 |
| Evidence |
experimental
cloned [1,3], Northern [1], 3'RACE [3], 5'RACE [3], 454 [4-5], MPSS [4] |
Mature ath-miR162b-5p
| Accession | MIMAT0031877 |
| Description | Arabidopsis thaliana ath-miR162b-5p mature miRNA |
| Sequence | 13 - UGGAGGCAGCGGUUCAUCGAUC - 34 |
| Evidence | not_experimental |
References
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