miRBase entry: mmu-mir-190a

Stem-loop mmu-mir-190a


Accession
MI0000232
Symbol
MGI: Mir190a
Description
Mus musculus mmu-mir-190a precursor miRNA
Gene family
MIPF0000076; mir-190

Literature search
19 open access papers mention mmu-mir-190a
(59 sentences)

Sequence

14711 reads, 182 reads per million, 71 experiments
cugugUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAGCAUAUUCCUacag
(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..)))))

Structure
     -U                UA     uuau 
cugug  GAUAUGUUUGAUAUAU  GGUug    u
|||||  ||||||||||||||||  |||||     
gacaU  UUAUACGAACUAUAUA  UCAac    u
     CC                --     cuaa 


Annotation confidence High
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Genome context
chr9: 67236660-67236726 [-]

Database links

Mature mmu-miR-190a-5p

Accession MIMAT0000220
Description Mus musculus mmu-miR-190a-5p mature miRNA
Sequence 6 - UGAUAUGUUUGAUAUAUUAGGU - 27
Evidence experimental
cloned [1-2], Illumina [4]
Database links
Predicted targets

Mature mmu-miR-190a-3p

Accession MIMAT0016998
Description Mus musculus mmu-miR-190a-3p mature miRNA
Sequence 42 - ACUAUAUAUCAAGCAUAUUCCU - 63
Evidence experimental
454 [3], Illumina [4]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12554859
    New microRNAs from mouse and human
    "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
    "RNA (2003) 9:175-179

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009

  4. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275