Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68 |
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|---|---|
| PubMed ID | 20668074 |
| Authors | "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H" |
| Journal | "J Virol |
| Volume | 84 |
| Pages | 10266-10275 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| mmu-mir-132 | MI0000158 | 277 | 11 | 75064508 | 75064573 | + | High |
| mmu-mir-134 | MI0000160 | 594 | 12 | 109700573 | 109700643 | + | High |
| mmu-mir-152 | MI0000174 | 2208 | 11 | 96741219 | 96741291 | + | High |
| mmu-mir-155 | MI0000177 | 616 | 16 | 84511028 | 84511092 | + | High |
| mmu-mir-182 | MI0000224 | 1100 | 6 | 30165917 | 30165991 | - | High |
| mmu-mir-190a | MI0000232 | 182 | 9 | 67143942 | 67144008 | - | High |
| mmu-mir-195a | MI0000237 | 1067 | 11 | 70125868 | 70125961 | + | High |
| mmu-mir-143 | MI0000257 | 19717 | 18 | 61782267 | 61782329 | - | High |
| mmu-mir-301a | MI0000401 | 1108 | 11 | 87003830 | 87003915 | + | High |
| mmu-mir-30d | MI0000549 | 4620 | 15 | 68213057 | 68213138 | - | High |
| mmu-mir-196a-1 | MI0000552 | 446 | 11 | 96155990 | 96156091 | + | High |
| mmu-let-7a-2 | MI0000557 | 54880 | 9 | 41448012 | 41448107 | + | High |
| mmu-let-7e | MI0000561 | 4644 | 17 | 18050614 | 18050706 | + | High |
| mmu-let-7f-2 | MI0000563 | 108671 | X | 150695342 | 150695424 | + | High |
| mmu-mir-16-2 | MI0000566 | 6356 | 3 | 68917235 | 68917329 | + | High |
| mmu-mir-23a | MI0000571 | 2981 | 8 | 84935147 | 84935221 | + | High |
| mmu-mir-96 | MI0000583 | 340 | 6 | 30169445 | 30169550 | - | High |
| mmu-mir-34a | MI0000584 | 514 | 4 | 150152911 | 150153012 | + | High |
| mmu-mir-98 | MI0000586 | 767 | X | 150696210 | 150696317 | + | High |
| mmu-mir-103-1 | MI0000587 | 16701 | 11 | 35673223 | 35673308 | + | High |
| mmu-mir-103-2 | MI0000588 | 16710 | 2 | 131129972 | 131130057 | + | High |
| mmu-mir-329 | MI0000605 | 312 | 12 | 109679915 | 109680011 | + | High |
| mmu-mir-350 | MI0000640 | 352 | 1 | 176599891 | 176599989 | - | High |
| mmu-mir-351 | MI0000643 | 1339 | X | 52142132 | 52142230 | - | High |
| mmu-mir-107 | MI0000684 | 15027 | 19 | 34798087 | 34798173 | - | High |
| mmu-mir-25 | MI0000689 | 8777 | 5 | 138163583 | 138163666 | - | High |
| mmu-mir-32 | MI0000691 | 208 | 4 | 56895229 | 56895298 | - | High |
| mmu-mir-100 | MI0000692 | 870 | 9 | 41442721 | 41442800 | + | High |
| mmu-mir-210 | MI0000695 | 436 | 7 | 140801297 | 140801406 | - | High |
| mmu-mir-26a-2 | MI0000706 | 8956 | 10 | 126831399 | 126831482 | + | High |
| mmu-mir-221 | MI0000709 | 2711 | X | 19012533 | 19012627 | - | High |
| mmu-mir-222 | MI0000710 | 2137 | X | 19013132 | 19013210 | - | High |
| mmu-mir-29b-2 | MI0000712 | 2042 | 1 | 194719348 | 194719428 | + | High |
| mmu-mir-19b-1 | MI0000718 | 2437 | 14 | 115281737 | 115281823 | + | High |
| mmu-mir-92a-1 | MI0000719 | 11693 | 14 | 115281859 | 115281938 | + | High |
| mmu-mir-181b-1 | MI0000723 | 2023 | 1 | 137894377 | 137894456 | + | High |
| mmu-mir-181c | MI0000724 | 830 | 8 | 84905502 | 84905590 | - | High |
| mmu-mir-217 | MI0000731 | 857 | 11 | 28713728 | 28713835 | + | High |
| mmu-mir-361 | MI0000761 | 332 | X | 111984521 | 111984590 | - | High |
| mmu-mir-379 | MI0000796 | 1971 | 12 | 109675494 | 109675559 | + | High |
| mmu-mir-196b | MI0001151 | 2846 | 6 | 52207061 | 52207145 | - | High |
| mmu-mir-410 | MI0001161 | 1045 | 12 | 109710149 | 109710229 | + | High |
| mmu-mir-370 | MI0001165 | 299 | 12 | 109584692 | 109584770 | + | High |
| mghv-mir-M1-1 | MI0001669 | None | U97553 | 196 | 260 | + | - |
| mghv-mir-M1-2 | MI0001670 | None | U97553 | 562 | 627 | + | - |
| mghv-mir-M1-3 | MI0001671 | None | U97553 | 638 | 698 | + | - |
| mghv-mir-M1-4 | MI0001672 | None | U97553 | 956 | 1049 | + | - |
| mghv-mir-M1-5 | MI0001673 | None | U97553 | 1255 | 1314 | + | - |
| mghv-mir-M1-6 | MI0001674 | None | U97553 | 1319 | 1381 | + | - |
| mghv-mir-M1-7 | MI0001675 | None | U97553 | 1660 | 1719 | + | - |
| mghv-mir-M1-8 | MI0001676 | None | U97553 | 3806 | 3876 | + | - |
| mghv-mir-M1-9 | MI0001677 | None | U97553 | 5525 | 5584 | + | - |
| mmu-mir-543 | MI0003519 | 445 | 12 | 109683692 | 109683767 | + | High |
| mmu-mir-670 | MI0004295 | 101 | 2 | 94091645 | 94091744 | - | High |
| mmu-mir-669a-1 | MI0004523 | 316 | 2 | 10481664 | 10481760 | + | High |
| mmu-mir-677 | MI0004634 | 109 | chr10 | 128085286 | 128085363 | + | Medium |
| mmu-mir-497a | MI0004636 | 867 | 11 | 70125543 | 70125626 | + | High |
| mmu-mir-700 | MI0004684 | 79 | 4 | 135143866 | 135143944 | - | High |
| mmu-mir-500 | MI0004702 | 189 | X | 7103922 | 7104013 | - | High |
| mmu-mir-652 | MI0004965 | 544 | X | 141521996 | 141522093 | + | High |
| mmu-mir-466h | MI0005511 | 128 | chr2 | 10514891 | 10514971 | + | High |
| mmu-mir-493 | MI0005514 | 107 | 12 | 109546667 | 109546749 | + | High |
| mmu-mir-466l | MI0006278 | 19 | 2 | 10520908 | 10521028 | + | Medium |
| mmu-mir-669d | MI0006281 | 100 | 2 | 10473154 | 10473274 | + | High |
| mmu-mir-466i | MI0006282 | 58210 | 13 | 17922058 | 17922178 | + | Medium |
| mmu-mir-669f | MI0006287 | 128 | 2 | 10472040 | 10472160 | + | Medium |
| mmu-mir-1948 | MI0009939 | 35 | 18 | 12847868 | 12847952 | + | High |
| mmu-mir-1981 | MI0009992 | 322 | 1 | 184554604 | 184554685 | - | High |
| mmu-mir-664 | MI0012531 | 157 | 1 | 184975172 | 184975240 | + | High |
| mghv-mir-M1-10 | MI0016250 | None | U97553 | 262 | 322 | + | - |
| mghv-mir-M1-11 | MI0016251 | None | U97553 | 759 | 811 | + | - |
| mghv-mir-M1-12 | MI0016252 | None | U97553 | 1720 | 1789 | + | - |
| mghv-mir-M1-13 | MI0016253 | None | U97553 | 3749 | 3808 | + | - |
| mghv-mir-M1-14 | MI0016254 | None | U97553 | 5102 | 5161 | + | - |
| mghv-mir-M1-15 | MI0016255 | None | U97553 | 5461 | 5514 | + | - |