Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68 |
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PubMed ID | 20668074 |
Authors | "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H" |
Journal | "J Virol |
Volume | 84 |
Pages | 10266-10275 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
mmu-mir-132 | MI0000158 | 277 | chr11 | 75173682 | 75173747 | + | High |
mmu-mir-134 | MI0000160 | 594 | chr12 | 109734139 | 109734209 | + | High |
mmu-mir-152 | MI0000174 | 2208 | chr11 | 96850393 | 96850465 | + | High |
mmu-mir-155 | MI0000177 | 616 | chr16 | 84714140 | 84714204 | + | High |
mmu-mir-182 | MI0000224 | 1100 | chr6 | 30165918 | 30165992 | - | High |
mmu-mir-190a | MI0000232 | 182 | chr9 | 67236660 | 67236726 | - | High |
mmu-mir-195a | MI0000237 | 1067 | chr11 | 70235042 | 70235135 | + | High |
mmu-mir-143 | MI0000257 | 19717 | chr18 | 61649196 | 61649258 | - | High |
mmu-mir-301a | MI0000401 | 1108 | chr11 | 87113004 | 87113089 | + | High |
mmu-mir-30d | MI0000549 | 4620 | chr15 | 68341208 | 68341289 | - | High |
mmu-mir-196a-1 | MI0000552 | 446 | chr11 | 96265164 | 96265265 | + | High |
mmu-let-7a-2 | MI0000557 | 54880 | chr9 | 41536716 | 41536811 | + | High |
mmu-let-7e | MI0000561 | 4644 | chr17 | 17830352 | 17830444 | + | High |
mmu-let-7f-2 | MI0000563 | 108671 | chrX | 151912346 | 151912428 | + | High |
mmu-mir-16-2 | MI0000566 | 6356 | chr3 | 69009902 | 69009996 | + | High |
mmu-mir-23a | MI0000571 | 2981 | chr8 | 84208518 | 84208592 | + | High |
mmu-mir-96 | MI0000583 | 340 | chr6 | 30169446 | 30169551 | - | High |
mmu-mir-34a | MI0000584 | 514 | chr4 | 150068454 | 150068555 | + | High |
mmu-mir-98 | MI0000586 | 767 | chrX | 151913214 | 151913321 | + | High |
mmu-mir-103-1 | MI0000587 | 16701 | chr11 | 35782396 | 35782481 | + | High |
mmu-mir-103-2 | MI0000588 | 16710 | chr2 | 131288052 | 131288137 | + | High |
mmu-mir-329 | MI0000605 | 312 | chr12 | 109713481 | 109713577 | + | High |
mmu-mir-350 | MI0000640 | 352 | chr1 | 176772325 | 176772423 | - | High |
mmu-mir-351 | MI0000643 | 1339 | chrX | 53053255 | 53053353 | - | High |
mmu-mir-107 | MI0000684 | 15027 | chr19 | 34820687 | 34820773 | - | High |
mmu-mir-25 | MI0000689 | 8777 | chr5 | 138165321 | 138165404 | - | High |
mmu-mir-32 | MI0000691 | 208 | chr4 | 56895229 | 56895298 | - | High |
mmu-mir-100 | MI0000692 | 870 | chr9 | 41531425 | 41531504 | + | High |
mmu-mir-210 | MI0000695 | 436 | chr7 | 141221384 | 141221493 | - | High |
mmu-mir-26a-2 | MI0000706 | 8956 | chr10 | 126995530 | 126995613 | + | High |
mmu-mir-221 | MI0000709 | 2711 | chrX | 19146294 | 19146388 | - | High |
mmu-mir-222 | MI0000710 | 2137 | chrX | 19146893 | 19146971 | - | High |
mmu-mir-29b-2 | MI0000712 | 2042 | chr1 | 195037040 | 195037120 | + | High |
mmu-mir-19b-1 | MI0000718 | 2437 | chr14 | 115044305 | 115044391 | + | High |
mmu-mir-92a-1 | MI0000719 | 11693 | chr14 | 115044427 | 115044506 | + | High |
mmu-mir-181b-1 | MI0000723 | 2023 | chr1 | 137966639 | 137966718 | + | High |
mmu-mir-181c | MI0000724 | 830 | chr8 | 84178873 | 84178961 | - | High |
mmu-mir-217 | MI0000731 | 857 | chr11 | 28763728 | 28763835 | + | High |
mmu-mir-361 | MI0000761 | 332 | chrX | 113074824 | 113074893 | - | High |
mmu-mir-379 | MI0000796 | 1971 | chr12 | 109709060 | 109709125 | + | High |
mmu-mir-196b | MI0001151 | 2846 | chr6 | 52230081 | 52230165 | - | High |
mmu-mir-410 | MI0001161 | 1045 | chr12 | 109743715 | 109743795 | + | High |
mmu-mir-370 | MI0001165 | 299 | chr12 | 109618258 | 109618336 | + | High |
mghv-mir-M1-1 | MI0001669 | None | U97553 | 196 | 260 | + | - |
mghv-mir-M1-2 | MI0001670 | None | U97553 | 562 | 627 | + | - |
mghv-mir-M1-3 | MI0001671 | None | U97553 | 638 | 698 | + | - |
mghv-mir-M1-4 | MI0001672 | None | U97553 | 956 | 1049 | + | - |
mghv-mir-M1-5 | MI0001673 | None | U97553 | 1255 | 1314 | + | - |
mghv-mir-M1-6 | MI0001674 | None | U97553 | 1319 | 1381 | + | - |
mghv-mir-M1-7 | MI0001675 | None | U97553 | 1660 | 1719 | + | - |
mghv-mir-M1-8 | MI0001676 | None | U97553 | 3806 | 3876 | + | - |
mghv-mir-M1-9 | MI0001677 | None | U97553 | 5525 | 5584 | + | - |
mmu-mir-543 | MI0003519 | 445 | chr12 | 109717258 | 109717333 | + | - |
mmu-mir-670 | MI0004295 | 101 | chr2 | 94261300 | 94261399 | - | High |
mmu-mir-669a-1 | MI0004523 | 316 | chr2 | 10476853 | 10476949 | + | High |
mmu-mir-677 | MI0004634 | 109 | chr10 | 128085286 | 128085363 | + | - |
mmu-mir-497a | MI0004636 | 867 | chr11 | 70234717 | 70234800 | + | - |
mmu-mir-700 | MI0004684 | 79 | chr4 | 135416555 | 135416633 | - | High |
mmu-mir-500 | MI0004702 | 189 | chrX | 7237683 | 7237774 | - | High |
mmu-mir-652 | MI0004965 | 544 | chrX | 142739000 | 142739097 | + | High |
mmu-mir-466h | MI0005511 | 128 | chr2 | 10514891 | 10514971 | + | - |
mmu-mir-493 | MI0005514 | 107 | chr12 | 109580233 | 109580315 | + | High |
mmu-mir-466l | MI0006278 | 19 | chr2 | 10516097 | 10516217 | + | High |
mmu-mir-669d | MI0006281 | 100 | chr2 | 10468343 | 10468463 | + | High |
mmu-mir-466i | MI0006282 | 58210 | chr13 | 17747473 | 17747593 | + | Low |
mmu-mir-669f | MI0006287 | 128 | chr2 | 10467229 | 10467349 | + | High |
mmu-mir-1948 | MI0009939 | 35 | chr18 | 12714811 | 12714895 | + | High |
mmu-mir-1981 | MI0009992 | 322 | chr1 | 184822407 | 184822488 | - | High |
mmu-mir-664 | MI0012531 | 157 | chr1 | 185242975 | 185243043 | + | - |
mghv-mir-M1-10 | MI0016250 | None | U97553 | 262 | 322 | + | - |
mghv-mir-M1-11 | MI0016251 | None | U97553 | 759 | 811 | + | - |
mghv-mir-M1-12 | MI0016252 | None | U97553 | 1720 | 1789 | + | - |
mghv-mir-M1-13 | MI0016253 | None | U97553 | 3749 | 3808 | + | - |
mghv-mir-M1-14 | MI0016254 | None | U97553 | 5102 | 5161 | + | - |
mghv-mir-M1-15 | MI0016255 | None | U97553 | 5461 | 5514 | + | - |