Accession
MI0000731
Symbol
MGI:
Mir217
Description
Mus musculus
mmu-mir-217 precursor miRNA mir-217
Gene
family?
family?
RF00673;
mir-217
Literature search
34 open access papers mention mmu-mir-217
(230 sentences)
(230 sentences)
Sequence
52169
reads,
857
reads per million, 53 experiments
aaacauagucauuacaguuuuugauguugcagaUACUGCAUCAGGAACUGACUGGAuaagacuuaaucccCAUCAGUUCCUAAUGCAUUGCCUucagcaucuaaacaa
................((((..(((((((.((.((.(((((.(((((((((..((((........))))...))))))))).))))).)).)).))))))).))))..
................((((..(((((((.((.((.(((((.(((((((((..((((........))))...))))))))).))))).)).)).))))))).))))..
Structure
aaacauagucauuaca uu c a C C -CU aag
guuu gauguug ag UA UGCAU AGGAACUGA GGAu a
|||| ||||||| || || ||||| ||||||||| ||||
caaa cuacgac UC GU ACGUA UCCUUGACU ccua c
--------------aa -u u C U A ACc auu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA was predicted by computational methods using conservation in with human, mouse and Fugu rubripes [1]. Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning. The mature mouse and human (MIR:MI0000293) sequences differ at a single position [2]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies in mouse [3].
Genome context
chr11: 28763728-28763835 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-217
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mmu-miR-217-5p
| Accession | MIMAT0000679 |
| Description | Mus musculus mmu-miR-217-5p mature miRNA |
| Sequence | 34 - UACUGCAUCAGGAACUGACUGGA - 56 |
| Evidence |
experimental
cloned [3], Illumina [4,6] |
| Database links |
|
| Predicted targets |
|
Mature mmu-miR-217-3p
| Accession | MIMAT0017072 |
| Description | Mus musculus mmu-miR-217-3p mature miRNA |
| Sequence | 71 - CAUCAGUUCCUAAUGCAUUGCCU - 93 |
| Evidence |
experimental
454 [5], Illumina [6] |
| Database links |
|
| Predicted targets |
|
References
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